RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 A0A1W2PPV4 95 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 SERTM1A2A2V5 107 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 PHF1O43189 567 aaPredicted RBP11.67□□□□□ -0.54
VAMP4-201ENST00000236192 GP1BBP13224 206 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 USF1P22415 310 aaPredicted RBP11.67□□□□□ -0.54
VAMP4-201ENST00000236192 MMP16P51512 607 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 SLC39A5Q6ZMH5 540 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 LIMS2Q7Z4I7 341 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 GKN2Q86XP6 184 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 SDSLQ96GA7 329 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 C1orf198Q9H425 327 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 GLIPR2Q9H4G4 154 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 NAT8Q9UHE5 227 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 VAX2Q9UIW0 290 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 ZMIZ1Q9ULJ6 1067 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 HSF4Q9ULV5 492 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 MRPS28Q9Y2Q9 187 aaKnown RBP11.67□□□□□ -0.54
VAMP4-201ENST00000236192 ARAP2Q8WZ64 1704 aa11.67□□□□□ -0.54
VAMP4-201ENST00000236192 M0R1X1 148 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 OR2J2O76002 312 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 WISP3O95389 354 aaPredicted RBP11.66□□□□□ -0.54
VAMP4-201ENST00000236192 RAB38P57729 211 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 CLN3Q13286 438 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 PDGFRLQ15198 375 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 UEVLDQ8IX04 471 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 CLEC1AQ8NC01 280 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 HSD17B8Q92506 261 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 ANAPC16Q96DE5 110 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 MACROD1Q9BQ69 325 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 UQCR10Q9UDW1 63 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 PRODH2Q9UF12 536 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 STARD10Q9Y365 291 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 KIAA1551Q9HCM1 1747 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 FIGNL2A6NMB9 653 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 DHRS7CA6NNS2 312 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 DTYMKP23919 212 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 PTGER1P34995 402 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 SCGB2A2Q13296 93 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 JOSD1Q15040 202 aaPredicted RBP11.66□□□□□ -0.54
VAMP4-201ENST00000236192 AGBL4Q5VU57 503 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 C22orf39Q6P5X5 142 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 C19orf47Q8N9M1 422 aaKnown RBP11.66□□□□□ -0.54
VAMP4-201ENST00000236192 LMLNQ96KR4 655 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 TMEM208Q9BTX3 173 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 TRBV11-1A0A0K0K1C0 115 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 PRNPP04156 253 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 SERPINE2P07093 398 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 MLF1P58340 268 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 DEGS2Q6QHC5 323 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 SLC35E3Q7Z769 313 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 NUDT11Q96G61 164 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 OR2J1Q9GZK6 312 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 ZNF442Q9H7R0 627 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 LRP5O75197 1615 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 TMEM272A0A1B0GTI8 110 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 CSNK1DP48730 415 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 ISXQ2M1V0 245 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 TAS1R1Q7RTX1 841 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 UHRF2Q96PU4 802 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 SOX7Q9BT81 388 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 CLDND1Q9NY35 253 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 HEBP2Q9Y5Z4 205 aa11.66□□□□□ -0.54
VAMP4-201ENST00000236192 DSPPQ9NZW4 1301 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 DDX60Q8IY21 1712 aaKnown RBP11.65□□□□□ -0.54
VAMP4-201ENST00000236192 GAPDHP04406 335 aaKnown RBP11.65□□□□□ -0.54
VAMP4-201ENST00000236192 HIST1H1CP16403 213 aaKnown RBP11.65□□□□□ -0.54
VAMP4-201ENST00000236192 PPICP45877 212 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 CDC34P49427 236 aaPredicted RBP11.65□□□□□ -0.54
VAMP4-201ENST00000236192 CNN1P51911 297 aaKnown RBP11.65□□□□□ -0.54
VAMP4-201ENST00000236192 LRRTM4Q86VH4 590 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 OR10A2Q9H208 303 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 SRSF3P84103 164 aaKnown RBP11.65□□□□□ -0.54
VAMP4-201ENST00000236192 VITQ6UXI7 678 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 WNT5BQ9H1J7 359 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 PLEKHF2Q9H8W4 249 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 PHPT1Q9NRX4 125 aaPredicted RBP11.65□□□□□ -0.54
VAMP4-201ENST00000236192 RCL1Q9Y2P8 373 aaKnown RBP11.65□□□□□ -0.54
VAMP4-201ENST00000236192 CLDN16Q9Y5I7 305 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 DUXBA0A1W2PPF3 345 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 TLCD2A6NGC4 264 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 C9J4A7 227 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 CXCL11O14625 94 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 KCNAB3O43448 404 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 XRCC2O43543 280 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 GNB3P16520 340 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 HNRNPA2B1P22626 353 aaKnown RBP11.65□□□□□ -0.54
VAMP4-201ENST00000236192 DPP4P27487 766 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 HOXA11P31270 313 aaPredicted RBP11.65□□□□□ -0.54
VAMP4-201ENST00000236192 PDX1P52945 283 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 ARHGAP19Q14CB8 494 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 MTURNQ8N3F0 131 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 KCNS2Q9ULS6 477 aa11.65□□□□□ -0.54
VAMP4-201ENST00000236192 MED19A0JLT2 244 aaPredicted RBP11.65□□□□□ -0.55
VAMP4-201ENST00000236192 PRAMEF27A3QJZ7 478 aa11.65□□□□□ -0.55
VAMP4-201ENST00000236192 CNOT4O95628 575 aaKnown RBP11.65□□□□□ -0.55
VAMP4-201ENST00000236192 PMCHP20382 165 aa11.65□□□□□ -0.55
VAMP4-201ENST00000236192 PCK2Q16822 640 aa11.65□□□□□ -0.55
VAMP4-201ENST00000236192 PRAMEF9Q5VWM5 478 aa11.65□□□□□ -0.55
VAMP4-201ENST00000236192 STUMQ69YW2 141 aa11.65□□□□□ -0.55
VAMP4-201ENST00000236192 IL22RA1Q8N6P7 574 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms