RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 ZNF883P0CG24 379 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 PGA4P0DJD7 388 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 PGA3P0DJD8 388 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 TSPAN7P41732 249 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 OR10K2Q6IF99 312 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 LPCAT3Q6P1A2 487 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 WDSUB1Q8N9V3 476 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 BVESQ8NE79 360 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 STEAP2Q8NFT2 490 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 OR4D6Q8NGJ1 314 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 OR5M8Q8NGP6 311 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 M1APQ8TC57 530 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 OXGR1Q96P68 337 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 SLC6A7Q99884 636 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 TMEM185BQ9H7F4 350 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 SLC39A1Q9NY26 324 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 SLC2A8Q9NY64 477 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 GDF2Q9UK05 429 aaPredicted RBP19.68■□□□□ 0.74
CCDC9-201ENST00000221922 HS3ST3B1Q9Y662 390 aa19.68■□□□□ 0.74
CCDC9-201ENST00000221922 COL27A1Q8IZC6 1860 aaPredicted RBP19.68■□□□□ 0.74
CCDC9-201ENST00000221922 A0A087WZY1 265 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 P2RY10O00398 339 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 TRAF3IP2O43734 574 aaPredicted RBP19.67■□□□□ 0.74
CCDC9-201ENST00000221922 MPZP25189 248 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 FGL1Q08830 312 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 DHRS2Q13268 280 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 MEF2DQ14814 521 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 INPP5JQ15735 1006 aaPredicted RBP19.67■□□□□ 0.74
CCDC9-201ENST00000221922 RAB12Q6IQ22 244 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 OPN5Q6U736 354 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 OR1J2Q8NGS2 313 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 OR6X1Q8NH79 312 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 LMX1BO60663 402 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 MGMTP16455 207 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 ZNF546Q86UE3 836 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 MOB1AQ9H8S9 216 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 ZMAT3Q9HA38 289 aaKnown RBP19.67■□□□□ 0.74
CCDC9-201ENST00000221922 RAB22AQ9UL26 194 aa19.67■□□□□ 0.74
CCDC9-201ENST00000221922 A0A0D9SG52 128 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 A0A1W2PNR3 127 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 OR14I1A6ND48 311 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 TMEM235A6NFC5 223 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 WIPF3A6NGB9 483 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 HPP00738 406 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 CELA2AP08217 269 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 ZNF260Q3ZCT1 412 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 ZNF813Q6ZN06 617 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 DBX2Q6ZNG2 339 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 ZNF584Q8IVC4 421 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 BEST3Q8N1M1 668 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 OR2AJ1Q8NGZ0 328 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 LHFPL5Q8TAF8 219 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 SLC25A32Q9H2D1 315 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 MYEF2Q9P2K5 600 aaKnown RBP19.66■□□□□ 0.74
CCDC9-201ENST00000221922 POLR1DQ9Y2S0 133 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 PHF3Q92576 2039 aaKnown RBP19.66■□□□□ 0.74
CCDC9-201ENST00000221922 ZDBF2Q9HCK1 2354 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 LOC102725191A0A1B0GVB3 256 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 METTL21EPA6NDL7 271 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 RAB27BO00194 218 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 SPDEFO95238 335 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 RLN2P04090 185 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 EIF1AXP47813 144 aaKnown RBP19.66■□□□□ 0.74
CCDC9-201ENST00000221922 SLC35A1P78382 337 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 HYAL4Q2M3T9 481 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 RHOUQ7L0Q8 258 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 PBOV1Q9GZY1 135 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 SMOC1Q9H4F8 434 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 ZNF230Q9UIE0 474 aaPredicted RBP19.66■□□□□ 0.74
CCDC9-201ENST00000221922 EML6Q6ZMW3 1958 aa19.66■□□□□ 0.74
CCDC9-201ENST00000221922 LOC101059948A0A1B0GTJ6 334 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 OR5H14A6NHG9 310 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 DISC1C4P0D8 188 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 TTRP02766 147 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 UBBP0CG47 229 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 ZNF43P17038 809 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 BDKRB2P30411 391 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 RPS27AP62979 156 aaKnown RBP19.65■□□□□ 0.74
CCDC9-201ENST00000221922 UBA52P62987 128 aaKnown RBP19.65■□□□□ 0.74
CCDC9-201ENST00000221922 LPAL2Q16609 132 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 SLC25A47Q6Q0C1 308 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 ZBTB44Q8NCP5 570 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 PRRT1Q99946 306 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 SEC61A2Q9H9S3 476 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 GLS2Q9UI32 602 aa19.65■□□□□ 0.74
CCDC9-201ENST00000221922 FARSAQ9Y285 508 aaKnown RBP19.65■□□□□ 0.74
CCDC9-201ENST00000221922 AQP7P3A6NL99 342 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 ZNF878C9JN71 531 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 TPD52L2O43399 206 aaKnown RBP19.64■□□□□ 0.74
CCDC9-201ENST00000221922 SYT7O43581 403 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 OPN1LWP04000 364 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 SLC25A4P12235 298 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 HLA-GP17693 338 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 HSD11B1P28845 292 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 CD34P28906 385 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 SFTPDP35247 375 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 ZNF345Q14585 488 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 TMEM176BQ3YBM2 270 aaPredicted RBP19.64■□□□□ 0.74
CCDC9-201ENST00000221922 PRAMEF20Q5VT98 475 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 SLC25A42Q86VD7 318 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms