RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 SRSF10O75494 262 aaKnown RBP20.23■□□□□ 0.83
HOMER3-201ENST00000221222 CLPTM1O96005 669 aa20.23■□□□□ 0.83
HOMER3-201ENST00000221222 RAC2P15153 192 aa20.23■□□□□ 0.83
HOMER3-201ENST00000221222 DNASE1P24855 282 aa20.23■□□□□ 0.83
HOMER3-201ENST00000221222 SNRPD2P62316 118 aaKnown RBP20.23■□□□□ 0.83
HOMER3-201ENST00000221222 MALLQ13021 153 aa20.23■□□□□ 0.83
HOMER3-201ENST00000221222 FAM57BQ71RH2 274 aa20.23■□□□□ 0.83
HOMER3-201ENST00000221222 KCTD20Q7Z5Y7 419 aa20.23■□□□□ 0.83
HOMER3-201ENST00000221222 YIPF7Q8N8F6 280 aa20.23■□□□□ 0.83
HOMER3-201ENST00000221222 HAVCR1Q96D42 359 aa20.23■□□□□ 0.83
HOMER3-201ENST00000221222 MRPL48Q96GC5 212 aaKnown RBP20.23■□□□□ 0.83
HOMER3-201ENST00000221222 FKBP14Q9NWM8 211 aa20.23■□□□□ 0.83
HOMER3-201ENST00000221222 MYEF2Q9P2K5 600 aaKnown RBP20.23■□□□□ 0.83
HOMER3-201ENST00000221222 TMEM269A0A1B0GVZ9 245 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 XRCC2O43543 280 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 BMP4P12644 408 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 KITLGP21583 273 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 ACTA2P62736 377 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 ACTG2P63267 376 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 PSG7Q13046 419 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 TMEM255AQ5JRV8 349 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 SPSB4Q96A44 273 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 CMBLQ96DG6 245 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 MBD6Q96DN6 1003 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 TMEM80Q96HE8 168 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 ALG8Q9BVK2 526 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 CXorf56Q9H5V9 222 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 BRD7Q9NPI1 651 aa20.22■□□□□ 0.83
HOMER3-201ENST00000221222 ADRA2AP08913 450 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 CCDC159P0C7I6 412 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 LIMS3P0CW19 117 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 LIMS4P0CW20 117 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 ST3GAL4Q11206 333 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 GK2Q14410 553 aaPredicted RBP20.21■□□□□ 0.83
HOMER3-201ENST00000221222 HLXQ14774 488 aaPredicted RBP20.21■□□□□ 0.83
HOMER3-201ENST00000221222 MOGQ16653 247 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 TP53I3Q53FA7 332 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 GLYATL3Q5SZD4 288 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 LIPNQ5VXI9 398 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 FAM220AQ7Z4H9 259 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 LHFPL3Q86UP9 236 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 SYS1Q8N2H4 156 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 PGAM5Q96HS1 289 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 OPA3Q9H6K4 179 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 ZNF319Q9P2F9 582 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 EXOSC1Q9Y3B2 195 aaKnown RBP20.21■□□□□ 0.83
HOMER3-201ENST00000221222 N6AMT1Q9Y5N5 214 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 R4GMQ9 66 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 PMF1-BGLAPU3KQ54 211 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 A0A1W2PPW3 197 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 H7C417 338 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 TBX1O43435 398 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 PNPP00491 289 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 TACSTD2P09758 323 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 PAX1P15863 534 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 PPOXP50336 477 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 ZNF92Q03936 586 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 AHSA2Q719I0 299 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 OR2AE1Q8NHA4 323 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 REPIN1Q9BWE0 567 aaKnown RBP20.21■□□□□ 0.83
HOMER3-201ENST00000221222 CACNG6Q9BXT2 260 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 OR10A2Q9H208 303 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 RGCCQ9H4X1 137 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 MOB1AQ9H8S9 216 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 ZNF701Q9NV72 531 aaPredicted RBP20.21■□□□□ 0.83
HOMER3-201ENST00000221222 BEX4Q9NWD9 120 aaPredicted RBP20.21■□□□□ 0.83
HOMER3-201ENST00000221222 SCN3BQ9NY72 215 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 TAAR3PQ9P1P4 343 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 NUFIP1Q9UHK0 495 aaKnown RBP20.21■□□□□ 0.83
HOMER3-201ENST00000221222 GPR160Q9UJ42 338 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 PURGQ9UJV8 347 aaKnown RBP20.21■□□□□ 0.83
HOMER3-201ENST00000221222 GNG8Q9UK08 70 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 PCDHGB5Q9Y5G0 923 aa20.21■□□□□ 0.83
HOMER3-201ENST00000221222 MAP1AP78559 2803 aaPredicted RBP20.2■□□□□ 0.82
HOMER3-201ENST00000221222 M0R233 179 aa20.2■□□□□ 0.82
HOMER3-201ENST00000221222 OR12D2P58182 307 aa20.2■□□□□ 0.82
HOMER3-201ENST00000221222 MFGE8Q08431 387 aaPredicted RBP20.2■□□□□ 0.82
HOMER3-201ENST00000221222 PGAP1Q75T13 922 aa20.2■□□□□ 0.82
HOMER3-201ENST00000221222 ZNF540Q8NDQ6 660 aa20.2■□□□□ 0.82
HOMER3-201ENST00000221222 OR8B12Q8NGG6 310 aa20.2■□□□□ 0.82
HOMER3-201ENST00000221222 SGK3Q96BR1 496 aa20.2■□□□□ 0.82
HOMER3-201ENST00000221222 SIGLEC11Q96RL6 698 aa20.2■□□□□ 0.82
HOMER3-201ENST00000221222 G6PC2Q9NQR9 355 aa20.2■□□□□ 0.82
HOMER3-201ENST00000221222 ACOXLQ9NUZ1 547 aa20.2■□□□□ 0.82
HOMER3-201ENST00000221222 CGGBP1Q9UFW8 167 aaPredicted RBP20.2■□□□□ 0.82
HOMER3-201ENST00000221222 ZNF391Q9UJN7 358 aa20.2■□□□□ 0.82
HOMER3-201ENST00000221222 SNX5Q9Y5X3 404 aa20.2■□□□□ 0.82
HOMER3-201ENST00000221222 LOC110117498-PIK3R3F6TDL0 507 aa20.19■□□□□ 0.82
HOMER3-201ENST00000221222 RPP14O95059 124 aaKnown RBP20.19■□□□□ 0.82
HOMER3-201ENST00000221222 ETV1P50549 477 aa20.19■□□□□ 0.82
HOMER3-201ENST00000221222 MMP15P51511 669 aa20.19■□□□□ 0.82
HOMER3-201ENST00000221222 MVKQ03426 396 aa20.19■□□□□ 0.82
HOMER3-201ENST00000221222 DEFB113Q30KQ7 82 aa20.19■□□□□ 0.82
HOMER3-201ENST00000221222 MRPL21Q7Z2W9 205 aaKnown RBP20.19■□□□□ 0.82
HOMER3-201ENST00000221222 RORBQ92753 470 aa20.19■□□□□ 0.82
HOMER3-201ENST00000221222 RNF166Q96A37 237 aaPredicted RBP20.19■□□□□ 0.82
HOMER3-201ENST00000221222 PBOV1Q9GZY1 135 aa20.19■□□□□ 0.82
HOMER3-201ENST00000221222 UBAP1Q9NZ09 502 aa20.19■□□□□ 0.82
HOMER3-201ENST00000221222 TPRKBQ9Y3C4 175 aa20.19■□□□□ 0.82
HOMER3-201ENST00000221222 USF3Q68DE3 2245 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms