RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TMEM128Q5BJH2 165 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 DCAF12Q5T6F0 453 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 DCXRQ7Z4W1 244 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 LRRC18Q8N456 261 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 HGDQ93099 445 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 ULBP2Q9BZM5 246 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 LOC107986453A0A1B0GWG9 222 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 ZNF264O43296 627 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 SCRG1O75711 98 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 GLSO94925 669 aaPredicted RBP9.49□□□□□ -0.89
VCL-201ENST00000211998 RRADP55042 308 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 B2MP61769 119 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 HTRA3P83110 453 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 ZNF92Q03936 586 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 DHRS2Q13268 280 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 CDKN3Q16667 212 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 OR4S1Q8NGB4 309 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 PRRX2Q99811 253 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 HEYLQ9NQ87 328 aaPredicted RBP9.49□□□□□ -0.89
VCL-201ENST00000211998 ASPDHA6ND91 283 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 EIF3GO75821 320 aaKnown RBP eCLIP9.49□□□□□ -0.89
VCL-201ENST00000211998 PPIAP62937 165 aaKnown RBP9.49□□□□□ -0.89
VCL-201ENST00000211998 ZNF684Q5T5D7 378 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 ETV3LQ6ZN32 361 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 PAQR9Q6ZVX9 377 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 ZNF426Q9BUY5 554 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 ZBP1Q9H171 429 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 ZNF552Q9H707 407 aaPredicted RBP9.49□□□□□ -0.89
VCL-201ENST00000211998 NGBQ9NPG2 151 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 A0A1W2PPE2 198 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 SERINC4A6NH21 518 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 K7ERU9 68 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 F12P00748 615 aaPredicted RBP9.49□□□□□ -0.89
VCL-201ENST00000211998 DIO1P49895 249 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 ZNF154Q13106 437 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 C12orf73Q69YU5 71 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 VWA1Q6PCB0 445 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 SHISA6Q6ZSJ9 500 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 TMEM104Q8NE00 496 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 CMTM2Q8TAZ6 248 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 MS4A3Q96HJ5 214 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 ABHD1Q96SE0 405 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 KCNJ15Q99712 375 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 LPAR3Q9UBY5 353 aa9.49□□□□□ -0.89
VCL-201ENST00000211998 OR5H15A6NDH6 313 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 OR5H1A6NKK0 313 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 TARM1B6A8C7 271 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 F11P03951 625 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 OR10J1P30954 320 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 INPP5JQ15735 1006 aaPredicted RBP9.48□□□□□ -0.89
VCL-201ENST00000211998 DND1Q8IYX4 353 aaKnown RBP9.48□□□□□ -0.89
VCL-201ENST00000211998 RBMXL3Q8N7X1 1067 aaKnown RBP9.48□□□□□ -0.89
VCL-201ENST00000211998 ARSGQ96EG1 525 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 SLC6A18Q96N87 628 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 MS4A8Q9BY19 250 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 PLEKHF2Q9H8W4 249 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 PISDQ9UG56 409 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 ZNF814B7Z6K7 855 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 GEMIN2O14893 280 aaKnown RBP9.48□□□□□ -0.89
VCL-201ENST00000211998 HLA-DRB3P79483 266 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 TMEM52BQ4KMG9 183 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 CATSPERDQ86XM0 798 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 SIRT6Q8N6T7 355 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 SLC35G3Q8N808 338 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 ARRDC3Q96B67 414 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 OR51B6Q9H340 312 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 RAB18Q9NP72 206 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 MMACHCQ9Y4U1 282 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 MRPL33O75394 65 aaKnown RBP9.48□□□□□ -0.89
VCL-201ENST00000211998 INHBBP09529 407 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 ERVS71-1P61550 626 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 PMP22Q01453 160 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 ZNF385BQ569K4 471 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 FAM219BQ5XKK7 198 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 ZNF385CQ66K41 422 aaPredicted RBP9.48□□□□□ -0.89
VCL-201ENST00000211998 PRR27Q6MZM9 219 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 SLC16A11Q8NCK7 471 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 KLHDC9Q8NEP7 349 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 UBL7Q96S82 380 aaPredicted RBP9.48□□□□□ -0.89
VCL-201ENST00000211998 SOX7Q9BT81 388 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 SIRT7Q9NRC8 400 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 A0A1B0GTL3 188 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 C2orf72A6NCS6 295 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 BMPR1BO00238 502 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 NID1P14543 1247 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 DDTP30046 118 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 ASCL1P50553 236 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 UBE2G1P62253 170 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 TMEM241Q24JQ0 296 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 COL5A1-AS1Q5SY13 56 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 NSUN5P2Q63ZY6 315 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 PLXDC2Q6UX71 529 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 MAML2Q8IZL2 1156 aaPredicted RBP9.48□□□□□ -0.89
VCL-201ENST00000211998 ZNRF4Q8WWF5 429 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 MIXL1Q9H2W2 232 aa9.48□□□□□ -0.89
VCL-201ENST00000211998 THAP10Q9P2Z0 257 aaPredicted RBP9.48□□□□□ -0.89
VCL-201ENST00000211998 SIGLEC5O15389 551 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 IAPPP10997 89 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 CHRNB4P30926 498 aa9.47□□□□□ -0.89
VCL-201ENST00000211998 UBE2G2P60604 165 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms