RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 GLRX2Q9NS18 164 aa13.64□□□□□ -0.23
LAPTM4A-201ENST00000175091 RABL2AQ9UBK7 228 aaPredicted RBP13.64□□□□□ -0.23
LAPTM4A-201ENST00000175091 RABL2BQ9UNT1 228 aa13.64□□□□□ -0.23
LAPTM4A-201ENST00000175091 RTTNQ86VV8 2226 aa13.64□□□□□ -0.23
LAPTM4A-201ENST00000175091 K7EM74 188 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 SPNP16150 400 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 ZNF20P17024 532 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 HTR2CP28335 458 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 BDKRB2P30411 391 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 GNALP38405 381 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR3A2P47893 321 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 POU3F4P49335 361 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 TPTEP56180 551 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 FAPQ12884 760 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 GUSBP1Q15486 140 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 SNAI3Q3KNW1 292 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 C9orf135Q5VTT2 229 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 P4HA3Q7Z4N8 544 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR51D1Q8NGF3 324 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR52H1Q8NGJ2 320 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR5D14Q8NGL3 314 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 FAM3DQ96BQ1 224 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 C12orf49Q9H741 205 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 CGGBP1Q9UFW8 167 aaPredicted RBP13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 PRSS50Q9UI38 385 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 ATMQ13315 3056 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 LOC100289279A0A1B0GTE1 492 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 CTDSPLO15194 276 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 PLA2G10O15496 165 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 DHRS3O75911 302 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 ABOP16442 354 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 EIF2S3P41091 472 aaKnown RBP13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 RFX2P48378 723 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 MMP15P51511 669 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 ART1P52961 327 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 PITPNAQ00169 270 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 PLA2G7Q13093 441 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 SLC36A2Q495M3 483 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 C1orf100Q5SVJ3 147 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 FGD2Q7Z6J4 655 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 NRARPQ7Z6K4 114 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 UBE2J2Q8N2K1 259 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 C19orf18Q8NEA5 215 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR13C9Q8NGT0 318 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 RFT1Q96AA3 541 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 FOXRED1Q96CU9 486 aaPredicted RBP13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 NKX3-1Q99801 234 aaPredicted RBP13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 C11orf54Q9H0W9 315 aaPredicted RBP13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR10A2Q9H208 303 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 PLEKHA1Q9HB21 404 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 TMEM138Q9NPI0 162 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 LHX6Q9UPM6 363 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 V9GYS6 101 aa13.63□□□□□ -0.23
LAPTM4A-201ENST00000175091 FUOMA2VDF0 154 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 MKRN2OSH3BPM6 223 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 ZNHIT1O43257 154 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 SULT1B1O43704 296 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 RAB3AP20336 220 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 MNDAP41218 407 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 PABPC1L2AQ5JQF8 200 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 GLYATL3Q5SZD4 288 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 FBXW9Q5XUX1 488 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 RPUSD3Q6P087 351 aaKnown RBP13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 CCBE1Q6UXH8 406 aaPredicted RBP13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 PGAP1Q75T13 922 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 JAGN1Q8N5M9 183 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 CCDC54Q8NEL0 328 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 S100A16Q96FQ6 103 aaKnown RBP13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 TRIB1Q96RU8 372 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 KCNK15Q9H427 330 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 METTL17Q9H7H0 456 aaPredicted RBP13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 DKK4Q9UBT3 224 aa13.62□□□□□ -0.23
LAPTM4A-201ENST00000175091 A0A096LPE4 126 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 LINC00854A0A1B0GVQ3 168 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 A0A1W2PPZ6 126 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR14I1A6ND48 311 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 ZNF503-AS2A6NEH8 195 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 LANCL1O43813 399 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 IL18BPO95998 194 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 BCAP31P51572 246 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 IZUMO1Q8IYV9 350 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR5AS1Q8N127 324 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 OR52N4Q8NGI2 321 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 SMIM4Q8WVI0 70 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 YIPF5Q969M3 257 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 SORCS2Q96PQ0 1159 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 THAP7Q9BT49 309 aaPredicted RBP13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 SLC22A4Q9H015 551 aa13.61□□□□□ -0.23
LAPTM4A-201ENST00000175091 TMEM272A0A1B0GTI8 110 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 EEF1E1O43324 174 aaKnown RBP13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 GSTZ1O43708 216 aaPredicted RBP13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 ERCC1P07992 297 aaPredicted RBP13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 TMIGD3P0DMS9 266 aaPredicted RBP13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 CDK2P24941 298 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 MPGP29372 298 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 THBS4P35443 961 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 EFNB2P52799 333 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 DGCR2P98153 550 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 C2orf76Q3KRA6 126 aa13.6□□□□□ -0.23
LAPTM4A-201ENST00000175091 ACSF3Q4G176 576 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms