RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Rps27aP62983 156 aaKnown RBP12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Uba52P62984 128 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Rpusd3Q14AI6 344 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Tubal3Q3UX10 446 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Guk1Q64520 198 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Gpatch2Q7TQC7 527 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Dtx3Q80V91 347 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Mospd3Q8BGG6 235 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Apbb3Q8R1C9 486 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 GgactQ923B0 149 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 OgfrQ99PG2 633 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Gfod2Q9CYH5 385 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Rita1Q9D1H0 253 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 IcaQ9DBD0 700 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Gm11214V9GX06 183 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Mmp27D3YV89 551 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Vmn2r16E9Q025 850 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Olfr427E9Q7E7 315 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 4930451I11RikE9Q9R3 111 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Psmb1O09061 240 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Myf5P24699 255 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Fli1P26323 452 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Ube2iP63280 158 aaKnown RBP12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Fam109bQ14B98 259 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Q3TEI4 1023 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Fbxo31Q3TQF0 507 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Mmp25Q3U435 615 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Hormad2Q5SQP1 306 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Pld6Q5SWZ9 221 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Tmem158Q6F5E0 286 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Tmem108Q8BHE4 574 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 ArsjQ8BM89 598 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Dzank1Q8C008 778 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Olfr291Q8VF60 317 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Olfr702Q920Z2 318 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 HypmQ9CR04 117 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Cnih4Q9CX13 139 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Kti12Q9D1R2 351 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Sdf2Q9DCT5 211 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Tnfsf14Q9QYH9 239 aa12.12□□□□□ -0.47
Nup88-201ENSMUST00000035283 Igkv17-127A0A0G2JDN5 117 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Gm29797A0A140LIA7 188 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Scgb1b30A2BH64 92 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 BC035044E0CXF8 138 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Gm8888J3QPX5 126 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Wisp1O54775 367 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 GhrhrP32082 423 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Gm10912Q3UXH0 145 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Klhl9Q6ZPT1 617 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Olfr201Q7TS38 308 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 C1sbQ8CFG8 688 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Nfatc4Q8K120 901 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 AfmidQ8K4H1 305 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Uqcr10Q8R1I1 64 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Vmn1r230Q8R2A2 316 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Swsap1Q8VCI7 278 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Olfr434Q8VF17 321 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Olfr539Q8VGL9 319 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 CsprsQ99388 208 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 SelenosQ9BCZ4 190 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Pga5Q9D106 387 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Get4Q9D1H7 327 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 RhagQ9QUT0 438 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Tcrg-V5A0A0G2JGV5 113 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Ndufaf5A2APY7 343 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Best1O88870 551 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 GcatO88986 416 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 CfdP03953 259 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Hmgn2P09602 90 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 ActbP60710 375 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Actg1P63260 375 aaKnown RBP12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 March9Q3TZ87 348 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Gpr160Q3U3F9 336 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Sec14l3Q5SQ27 401 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Rpl35Q6ZWV7 123 aaKnown RBP12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 TifaQ793I8 184 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Tmem106cQ80VP8 260 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 LssQ8BLN5 733 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Znf436Q8BPP0 452 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Akr7a2Q8CG76 367 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Lin28aQ8K3Y3 209 aaKnown RBP12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Rcc1Q8VE37 421 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 MetrnlQ8VE43 311 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Cdc42ep1Q91W92 409 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Pcdhga3Q91XY5 928 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Tmem216Q9CQC4 141 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Gpn3Q9D3W4 284 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Arfgap3Q9D8S3 523 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Nckap5E9QAE1 1909 aa12.11□□□□□ -0.47
Nup88-201ENSMUST00000035283 Gm12355A2A4X6 163 aa12.1□□□□□ -0.47
Nup88-201ENSMUST00000035283 Pusl1A2ADA5 291 aa12.1□□□□□ -0.47
Nup88-201ENSMUST00000035283 Gm5407E9Q7Q1 248 aa12.1□□□□□ -0.47
Nup88-201ENSMUST00000035283 Psmd4O35226 376 aaKnown RBP12.1□□□□□ -0.47
Nup88-201ENSMUST00000035283 Adam10O35598 749 aa12.1□□□□□ -0.47
Nup88-201ENSMUST00000035283 Entpd2O55026 495 aa12.1□□□□□ -0.47
Nup88-201ENSMUST00000035283 Lmx1bO88609 395 aa12.1□□□□□ -0.47
Nup88-201ENSMUST00000035283 Hmga2P52927 108 aa12.1□□□□□ -0.47
Nup88-201ENSMUST00000035283 Elavl1P70372 326 aaKnown RBP12.1□□□□□ -0.47
Nup88-201ENSMUST00000035283 Srsf3P84104 164 aaKnown RBP12.1□□□□□ -0.47
Nup88-201ENSMUST00000035283 Scand1Q2M4I6 142 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 89.8 ms