RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 CPEB3Q8NE35 698 aaKnown RBP11.24□□□□□ -0.61
PHGDH-218ENST00000641491 SPOCK3Q9BQ16 436 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 PLEKHA1Q9HB21 404 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 BABAM2Q9NXR7 383 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 MRM2Q9UI43 246 aaKnown RBP11.24□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF391Q9UJN7 358 aa11.24□□□□□ -0.61
PHGDH-218ENST00000641491 TRBV2A0A0J9YWF9 115 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.23□□□□□ -0.61
PHGDH-218ENST00000641491 MTRF1O75570 445 aaKnown RBP11.23□□□□□ -0.61
PHGDH-218ENST00000641491 THBDP07204 575 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 DBHP09172 617 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 ACSM4P0C7M7 580 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 OCM2P0CE71 109 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 OCMP0CE72 109 aaPredicted RBP11.23□□□□□ -0.61
PHGDH-218ENST00000641491 FAM157BP0CG42 384 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 LIMS3P0CW19 117 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 LIMS4P0CW20 117 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 SLC2A1P11166 492 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 SELEP16581 610 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 TUBG1P23258 451 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 PCSK6P29122 969 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 PSMB10P40306 273 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 CDH15P55291 814 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 NEDD8Q15843 81 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 MOGQ16653 247 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 CCDC58Q4VC31 144 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 OR2G6Q5TZ20 316 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF787Q6DD87 383 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 RGS7BPQ6MZT1 257 aaPredicted RBP11.23□□□□□ -0.61
PHGDH-218ENST00000641491 ADAM5Q6NVV9 412 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 RPL22L1Q6P5R6 122 aaKnown RBP11.23□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF704Q6ZNC4 412 aaPredicted RBP11.23□□□□□ -0.61
PHGDH-218ENST00000641491 NANOGP1Q8N7R0 232 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 OR1J1Q8NGS3 322 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 TSEN15Q8WW01 171 aaKnown RBP11.23□□□□□ -0.61
PHGDH-218ENST00000641491 SLC7A6Q92536 515 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 POM121L2Q96KW2 1035 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 AMELYQ99218 206 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 PBOV1Q9GZY1 135 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 RGCCQ9H4X1 137 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 PNRC2Q9NPJ4 139 aaKnown RBP11.23□□□□□ -0.61
PHGDH-218ENST00000641491 TUBG2Q9NRH3 451 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 FAIMQ9NVQ4 179 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 PAK1IP1Q9NWT1 392 aaPredicted RBP11.23□□□□□ -0.61
PHGDH-218ENST00000641491 NPAP1Q9NZP6 1156 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 CLEC2DQ9UHP7 191 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 GPR160Q9UJ42 338 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 OR52A1Q9UKL2 312 aa11.23□□□□□ -0.61
PHGDH-218ENST00000641491 PNMA8CA0A1B0GUJ8 204 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 GGT3PA6NGU5 568 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 TMEM212A6NML5 194 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 ATP6V1G2-DDX39BF2Z307 99 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 NOL3O60936 208 aaKnown RBP11.22□□□□□ -0.61
PHGDH-218ENST00000641491 CLPTM1O96005 669 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 PSKH1P11801 424 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF12P17014 697 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 MAP2K4P45985 399 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 UCP2P55851 309 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 PPP1CBP62140 327 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 BDH1Q02338 343 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 ODF4Q2M2E3 257 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF718Q3SXZ3 478 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 NCMAPQ5T1S8 102 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 KCTD8Q6ZWB6 473 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 PGAP1Q75T13 922 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 TMEM200AQ86VY9 491 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF584Q8IVC4 421 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 SPARTQ8N0X7 666 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 OR10S1Q8NGN2 331 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 OR5AK2Q8NH90 309 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 THRSPQ92748 146 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 ISG20L2Q9H9L3 353 aaKnown RBP11.22□□□□□ -0.61
PHGDH-218ENST00000641491 TBCCD1Q9NVR7 557 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 PTTG3PQ9NZH4 202 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 CMAHPQ9Y471 501 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 FBN2P35556 2912 aa11.22□□□□□ -0.61
PHGDH-218ENST00000641491 HIVEP3Q5T1R4 2406 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 LOC100509620A0A075B734 347 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 A0A1W2PPW3 197 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 C19orf84I3L1E1 186 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 MAGEB4O15481 346 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-218ENST00000641491 SYT7O43581 403 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 SMPD2O60906 423 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 SERPINA3P01011 423 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 RNF224P0DH78 156 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 BMP4P12644 408 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 ZNF20P17024 532 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 TGM4P49221 684 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 MMP16P51512 607 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 SLC3A1Q07837 685 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 ALKBH1Q13686 389 aaKnown RBP11.21□□□□□ -0.61
PHGDH-218ENST00000641491 TMEM244Q5VVB8 128 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 SP5Q6BEB4 398 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-218ENST00000641491 CCDC54Q8NEL0 328 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 PELI1Q96FA3 418 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 REEP6Q96HR9 211 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 SIGLEC11Q96RL6 698 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 ACOT13Q9NPJ3 140 aa11.21□□□□□ -0.61
PHGDH-218ENST00000641491 NUFIP1Q9UHK0 495 aaKnown RBP11.21□□□□□ -0.61
PHGDH-218ENST00000641491 DIDO1Q9BTC0 2240 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms