RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 TIMM8AO60220 97 aaPredicted RBP22.7■■□□□ 1.22
VEGFA-231ENST00000640499 ADH4P08319 380 aa22.7■■□□□ 1.22
VEGFA-231ENST00000640499 MRPL3P09001 348 aaKnown RBP22.7■■□□□ 1.22
VEGFA-231ENST00000640499 SLC2A1P11166 492 aa22.7■■□□□ 1.22
VEGFA-231ENST00000640499 GIFP27352 417 aa22.7■■□□□ 1.22
VEGFA-231ENST00000640499 CDK5R2Q13319 367 aa22.7■■□□□ 1.22
VEGFA-231ENST00000640499 RIN1Q13671 783 aa22.7■■□□□ 1.22
VEGFA-231ENST00000640499 GK2Q14410 553 aaPredicted RBP22.7■■□□□ 1.22
VEGFA-231ENST00000640499 CARTPTQ16568 116 aa22.7■■□□□ 1.22
VEGFA-231ENST00000640499 TSTQ16762 297 aaKnown RBP22.7■■□□□ 1.22
VEGFA-231ENST00000640499 ZNF454Q8N9F8 522 aa22.7■■□□□ 1.22
VEGFA-231ENST00000640499 TOR3AQ9H497 397 aa22.7■■□□□ 1.22
VEGFA-231ENST00000640499 COPS3Q9UNS2 423 aa22.7■■□□□ 1.22
VEGFA-231ENST00000640499 ANK3Q12955 4377 aaKnown RBP22.69■■□□□ 1.22
VEGFA-231ENST00000640499 RP2O75695 350 aa22.69■■□□□ 1.22
VEGFA-231ENST00000640499 LY6G6DO95868 133 aa22.69■■□□□ 1.22
VEGFA-231ENST00000640499 NR4A2P43354 598 aa22.69■■□□□ 1.22
VEGFA-231ENST00000640499 HNRNPA0Q13151 305 aaKnown RBP22.69■■□□□ 1.22
VEGFA-231ENST00000640499 ZBTB49Q6ZSB9 765 aa22.69■■□□□ 1.22
VEGFA-231ENST00000640499 RHOUQ7L0Q8 258 aa22.69■■□□□ 1.22
VEGFA-231ENST00000640499 BIVMQ86UB2 503 aa22.69■■□□□ 1.22
VEGFA-231ENST00000640499 THEM6Q8WUY1 208 aa22.69■■□□□ 1.22
VEGFA-231ENST00000640499 STMN2Q93045 179 aa22.69■■□□□ 1.22
VEGFA-231ENST00000640499 YIPF3Q9GZM5 350 aa22.69■■□□□ 1.22
VEGFA-231ENST00000640499 NDUFS8O00217 210 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 DLGAP1O14490 977 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 LYNP07948 512 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 SLC25A16P16260 332 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 LIPAP38571 399 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 SLC6A9P48067 706 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 RAD23AP54725 363 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 GRB2P62993 217 aaKnown RBP22.68■■□□□ 1.22
VEGFA-231ENST00000640499 ZNF92Q03936 586 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 TAF13Q15543 124 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 PCGF3Q3KNV8 242 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 OR5AS1Q8N127 324 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 RFLNBQ8N5W9 214 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 EME1Q96AY2 570 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 ADGRL4Q9HBW9 690 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 CYSLTR2Q9NS75 346 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 HAO2Q9NYQ3 351 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 ZNF319Q9P2F9 582 aa22.68■■□□□ 1.22
VEGFA-231ENST00000640499 PLSCR5A0PG75 271 aa22.67■■□□□ 1.22
VEGFA-231ENST00000640499 ANPEPP15144 967 aa22.67■■□□□ 1.22
VEGFA-231ENST00000640499 CX3CR1P49238 355 aa22.67■■□□□ 1.22
VEGFA-231ENST00000640499 MRPS11P82912 194 aaKnown RBP22.67■■□□□ 1.22
VEGFA-231ENST00000640499 LOXL1Q08397 574 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-231ENST00000640499 GLYATL3Q5SZD4 288 aa22.67■■□□□ 1.22
VEGFA-231ENST00000640499 OR8J1Q8NGP2 316 aa22.67■■□□□ 1.22
VEGFA-231ENST00000640499 OR2AE1Q8NHA4 323 aa22.67■■□□□ 1.22
VEGFA-231ENST00000640499 RDH5Q92781 318 aa22.67■■□□□ 1.22
VEGFA-231ENST00000640499 ZNF582Q96NG8 517 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-231ENST00000640499 BPESC1Q9GZL8 116 aa22.67■■□□□ 1.22
VEGFA-231ENST00000640499 CGGBP1Q9UFW8 167 aaPredicted RBP22.67■■□□□ 1.22
VEGFA-231ENST00000640499 CACNG2Q9Y698 323 aa22.67■■□□□ 1.22
VEGFA-231ENST00000640499 IGHV4-61A0A0C4DH41 118 aa22.66■■□□□ 1.22
VEGFA-231ENST00000640499 MT-ND5P03915 603 aa22.66■■□□□ 1.22
VEGFA-231ENST00000640499 CD55P08174 381 aa22.66■■□□□ 1.22
VEGFA-231ENST00000640499 RBMXP38159 391 aaKnown RBP22.66■■□□□ 1.22
VEGFA-231ENST00000640499 SLC15A1P46059 708 aa22.66■■□□□ 1.22
VEGFA-231ENST00000640499 LCN1P1Q5VSP4 162 aa22.66■■□□□ 1.22
VEGFA-231ENST00000640499 LRRN1Q6UXK5 716 aa22.66■■□□□ 1.22
VEGFA-231ENST00000640499 ZNF283Q8N7M2 679 aa22.66■■□□□ 1.22
VEGFA-231ENST00000640499 PIMREGQ9BSJ6 248 aa22.66■■□□□ 1.22
VEGFA-231ENST00000640499 REPIN1Q9BWE0 567 aaKnown RBP22.66■■□□□ 1.22
VEGFA-231ENST00000640499 DNAJC27Q9NZQ0 273 aa22.66■■□□□ 1.22
VEGFA-231ENST00000640499 H2AFY2Q9P0M6 372 aaPredicted RBP22.66■■□□□ 1.22
VEGFA-231ENST00000640499 ZDHHC8Q9ULC8 765 aa22.66■■□□□ 1.22
VEGFA-231ENST00000640499 TLN2Q9Y4G6 2542 aa22.66■■□□□ 1.22
VEGFA-231ENST00000640499 SLC22A31A6NKX4 558 aa22.65■■□□□ 1.22
VEGFA-231ENST00000640499 IQCF6A8MYZ5 107 aa22.65■■□□□ 1.22
VEGFA-231ENST00000640499 CDC14BO60729 498 aa22.65■■□□□ 1.22
VEGFA-231ENST00000640499 CRYBB2P43320 205 aa22.65■■□□□ 1.22
VEGFA-231ENST00000640499 ZNF121P58317 390 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-231ENST00000640499 RCN1Q15293 331 aa22.65■■□□□ 1.22
VEGFA-231ENST00000640499 FAM209AQ5JX71 171 aa22.65■■□□□ 1.22
VEGFA-231ENST00000640499 Q71RC1 249 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-231ENST00000640499 OR8G5Q8NG78 346 aa22.65■■□□□ 1.22
VEGFA-231ENST00000640499 FAM81AQ8TBF8 368 aa22.65■■□□□ 1.22
VEGFA-231ENST00000640499 ZNF275Q9NSD4 429 aaPredicted RBP22.65■■□□□ 1.22
VEGFA-231ENST00000640499 AASSQ9UDR5 926 aa22.65■■□□□ 1.22
VEGFA-231ENST00000640499 LAMP5Q9UJQ1 280 aa22.65■■□□□ 1.22
VEGFA-231ENST00000640499 N6AMT1Q9Y5N5 214 aa22.65■■□□□ 1.22
VEGFA-231ENST00000640499 ORC6Q9Y5N6 252 aa22.65■■□□□ 1.22
VEGFA-231ENST00000640499 A0A1B0GWJ7 208 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 H0YL77 283 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 H2BFMP0C1H6 154 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 GABRB1P18505 474 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 USF1P22415 310 aaPredicted RBP22.64■■□□□ 1.21
VEGFA-231ENST00000640499 HTR1FP30939 366 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 LPCAT4Q643R3 524 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 CLEC9AQ6UXN8 241 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 USP51Q70EK9 711 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 GID4Q8IVV7 300 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 SPSB4Q96A44 273 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 SGK3Q96BR1 496 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 CNN2Q99439 309 aaKnown RBP22.64■■□□□ 1.21
VEGFA-231ENST00000640499 SLC30A2Q9BRI3 323 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 CHODLQ9H9P2 273 aa22.64■■□□□ 1.21
VEGFA-231ENST00000640499 ABCA1O95477 2261 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms