RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TMEM200CA6NKL6 621 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 ATG12O94817 140 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 S100PP25815 95 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 SLC25A1P53007 311 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 USF2Q15853 346 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-216ENST00000639300 OR52W1Q6IF63 320 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 OR51F2Q8NH61 342 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 RNF141Q8WVD5 230 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 OR5B12Q96R08 314 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 BIN3Q9NQY0 253 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 CES1P1Q9UKY3 287 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 GPR179Q6PRD1 2367 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 MN1Q10571 1320 aaPredicted RBP12.98□□□□□ -0.33
SCARB2-216ENST00000639300 C5orf67F2Z3F1 127 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 MSTNO14793 375 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 SCO1O75880 301 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 GPR3P46089 330 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 ZNF141Q15928 474 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 OCSTAMPQ9BR26 566 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 LANCL2Q9NS86 450 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 SDHAF2Q9NX18 166 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 CSAG2Q9Y5P2 127 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 ACTL6BO94805 426 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 SNAPINO95295 136 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 B4GALT1P15291 398 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 TCTE3Q8IZS6 198 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 ROBO4Q8WZ75 1007 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 APH1AQ96BI3 265 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 TSPAN32Q96QS1 320 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 CFHR5Q9BXR6 569 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 BCO1Q9HAY6 547 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 QPCTLQ9NXS2 382 aa12.98□□□□□ -0.33
SCARB2-216ENST00000639300 PUS1Q9Y606 427 aaKnown RBP eCLIP12.98□□□□□ -0.33
SCARB2-216ENST00000639300 ROS1P08922 2347 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 ALG1L2C9J202 215 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 YKT6O15498 198 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 ANGPTL7O43827 346 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 FKBP2P26885 142 aaKnown RBP12.97□□□□□ -0.33
SCARB2-216ENST00000639300 CCL11P51671 97 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 CAMK2BQ13554 666 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 PEA15Q15121 130 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 FAM74A1Q5RGS3 127 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 NLRC3Q7RTR2 1065 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 OR5AS1Q8N127 324 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 CMBLQ96DG6 245 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 ZNF2Q9BSG1 426 aaPredicted RBP12.97□□□□□ -0.33
SCARB2-216ENST00000639300 SLC25A31Q9H0C2 315 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 NELFAQ9H3P2 528 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 FAM212BQ9NTI7 297 aaPredicted RBP12.97□□□□□ -0.33
SCARB2-216ENST00000639300 ZNF223Q9UK11 482 aaPredicted RBP12.97□□□□□ -0.33
SCARB2-216ENST00000639300 FBXO4Q9UKT5 387 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 NXPH2O95156 264 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 FOXL2P58012 376 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 ST3GAL2Q16842 350 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 WDR5BQ86VZ2 330 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 ZNF321PQ8N8H1 164 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 SUMF2Q8NBJ7 301 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 CNTNAP3Q9BZ76 1288 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 LHX9Q9NQ69 397 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 V9GYH0 126 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 RER1O15258 196 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 RGS11O94810 467 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 AVPR2P30518 371 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 ZNF674Q2M3X9 581 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 BPHLQ86WA6 291 aaPredicted RBP12.97□□□□□ -0.33
SCARB2-216ENST00000639300 AKR7LQ8NHP1 331 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 RDH5Q92781 318 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 TP53TG5Q9Y2B4 290 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 DTX4Q9Y2E6 619 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 MED12Q93074 2177 aa12.97□□□□□ -0.33
SCARB2-216ENST00000639300 CEBPZOSA8MTT3 80 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 SHBQ15464 509 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 DMKNQ6E0U4 476 aaPredicted RBP12.96□□□□□ -0.33
SCARB2-216ENST00000639300 LAIR2Q6ISS4 152 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 C6orf15Q6UXA7 325 aaPredicted RBP12.96□□□□□ -0.33
SCARB2-216ENST00000639300 OR51H1Q8NH63 302 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 MARVELD1Q9BSK0 173 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 TNS1Q9HBL0 1735 aaKnown RBP12.96□□□□□ -0.33
SCARB2-216ENST00000639300 IMPA2O14732 288 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 HS3ST1O14792 307 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 GPR137BO60478 399 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 GRPP07492 148 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 ALDH3B1P43353 468 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 ERVK-16P61578 105 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 SHEQ5VZ18 495 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 TMEM200AQ86VY9 491 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 TCEAL3Q969E4 200 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 ARL5BQ96KC2 179 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 FER1L6-AS2Q96M78 137 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 SPTBN1Q01082 2364 aaKnown RBP12.96□□□□□ -0.33
SCARB2-216ENST00000639300 TNFSF11O14788 317 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 PLA2G10O15496 165 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 GALP22466 123 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 PSMB6P28072 239 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 OR56B2PQ8NGI1 322 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 SP7Q8TDD2 431 aaPredicted RBP12.96□□□□□ -0.33
SCARB2-216ENST00000639300 DEFB127Q9H1M4 99 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 GNG12Q9UBI6 72 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 SLC23A1Q9UHI7 598 aa12.96□□□□□ -0.33
SCARB2-216ENST00000639300 DOCK6Q96HP0 2047 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms