RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 OR56A5P0C7T3 313 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 CD59P13987 128 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 PAX1P15863 534 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 ABOP16442 354 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 GPX2P18283 190 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 MAOAP21397 527 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 AK4P27144 223 aaPredicted RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 CHATP28329 748 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 HOXD3P31249 432 aaPredicted RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 S100A11P31949 105 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 OR3A4PP47883 348 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 ZNF84P51523 738 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 CDH11P55287 796 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 XGP55808 180 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 DLX6P56179 175 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 CLDN17P56750 224 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 TCTAP57738 103 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 ZNF121P58317 390 aaPredicted RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 HILS1P60008 231 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 SUMO2P61956 95 aaKnown RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 SELENOTP62341 195 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 TBPL1P62380 186 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 RPS4XP62701 263 aaKnown RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 RAP1AP62834 184 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 HSF1Q00613 529 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 KLF5Q13887 457 aaPredicted RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 EDDM3AQ14507 147 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 RSU1Q15404 277 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 GUSBP1Q15486 140 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 OR8G1Q15617 311 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 C3AR1Q16581 482 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 LRRC75BQ2VPJ9 315 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 TMEM97Q5BJF2 176 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 DCAF10Q5QP82 559 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 ATAD3CQ5T2N8 411 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 HENMT1Q5T8I9 393 aaKnown RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 CST9Q5W186 159 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 WDR74Q6RFH5 385 aaPredicted RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 SHC4Q6S5L8 630 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 BAIAP2L2Q6UXY1 529 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 RAD9BQ6WBX8 426 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 TMEM64Q6YI46 380 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 ZNF782Q6ZMW2 699 aaPredicted RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 Q71RC1 249 aaPredicted RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 ASRGL1Q7L266 308 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 FAM19A5Q7Z5A7 132 aaPredicted RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 CARM1Q86X55 608 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 CATSPER3Q86XQ3 398 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 KIR3DL3Q8N743 410 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 TPRX1Q8N7U7 411 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 PRR26Q8N8Z3 221 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 SCCPDHQ8NBX0 429 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 OR4D9Q8NGE8 314 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 OR10G9Q8NGN4 311 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 OR1S2Q8NGQ3 325 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 CNIH3Q8TBE1 160 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 RDH11Q8TC12 318 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 GATAD1Q8WUU5 269 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 EEF1AKMT1Q8WVE0 214 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 HPSE2Q8WWQ2 592 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 SEH1LQ96EE3 360 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 SMARCD1Q96GM5 515 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 CAPZA3Q96KX2 299 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 MAGEB18Q96M61 343 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 RBP7Q96R05 134 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 ZNF382Q96SR6 550 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 P2RX4Q99571 388 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 LPAR4Q99677 370 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 NKX3-1Q99801 234 aaPredicted RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 PDCD10Q9BUL8 212 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 TBL1XR1Q9BZK7 514 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 CHIAQ9BZP6 476 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 OR11A1Q9GZK7 315 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 SEMA6AQ9H2E6 1030 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 AAMDCQ9H7C9 122 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 B3GAT2Q9NPZ5 323 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 MCUBQ9NWR8 336 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 FLRT3Q9NZU0 649 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 OR1A1Q9P1Q5 309 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 SLC12A6Q9UHW9 1150 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 KCNS2Q9ULS6 477 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 PSG8Q9UQ74 426 aa2.59□□□□□ -1.99
VIM-210ENST00000637053 RBM7Q9Y580 266 aaKnown RBP2.59□□□□□ -1.99
VIM-210ENST00000637053 ZNF609O15014 1411 aa2.59□□□□□ -2
VIM-210ENST00000637053 RAPGEF2Q9Y4G8 1499 aa2.58□□□□□ -2
VIM-210ENST00000637053 A0A087WUJ7 227 aa2.58□□□□□ -2
VIM-210ENST00000637053 A0A096LPK6 155 aa2.58□□□□□ -2
VIM-210ENST00000637053 TRBV4-1A0A0J9YWV2 114 aa2.58□□□□□ -2
VIM-210ENST00000637053 SMIM31A0A1B0GVY4 71 aa2.58□□□□□ -2
VIM-210ENST00000637053 FAM231BA6NCW3 169 aa2.58□□□□□ -2
VIM-210ENST00000637053 OR5H14A6NHG9 310 aa2.58□□□□□ -2
VIM-210ENST00000637053 HACD1B0YJ81 288 aa2.58□□□□□ -2
VIM-210ENST00000637053 FAM90A26D6RGX4 464 aa2.58□□□□□ -2
VIM-210ENST00000637053 K7ERI5 159 aa2.58□□□□□ -2
VIM-210ENST00000637053 MLNRO43193 412 aa2.58□□□□□ -2
VIM-210ENST00000637053 TCF21O43680 179 aa2.58□□□□□ -2
VIM-210ENST00000637053 TRIAP1O43715 76 aa2.58□□□□□ -2
VIM-210ENST00000637053 SYNGR1O43759 233 aa2.58□□□□□ -2
VIM-210ENST00000637053 ORC5O43913 435 aa2.58□□□□□ -2
VIM-210ENST00000637053 GGCTO75223 188 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms