RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 C5orf46Q6UWT4 87 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 HIST3H2AQ7L7L0 130 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 GPAT4Q86UL3 456 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 PARP16Q8N5Y8 322 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 ARIH2OSQ8N7S6 290 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 LRRC75AQ8NAA5 344 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 NPEPL1Q8NDH3 523 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 OR1K1Q8NGR3 316 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 OR2T27Q8NH04 317 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 HIST1H2ACQ93077 130 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 CNN2Q99439 309 aaKnown RBP10.93□□□□□ -0.66
CTSD-208ENST00000636843 DDOQ99489 341 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 SLC30A2Q9BRI3 323 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 BARHL1Q9BZE3 327 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 NMNAT2Q9BZQ4 307 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 KCNN2Q9H2S1 579 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 ISG20L2Q9H9L3 353 aaKnown RBP10.93□□□□□ -0.66
CTSD-208ENST00000636843 FBXO9Q9UK97 447 aaPredicted RBP10.93□□□□□ -0.66
CTSD-208ENST00000636843 RASD1Q9Y272 281 aa10.93□□□□□ -0.66
CTSD-208ENST00000636843 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.93□□□□□ -0.664e-7■■□□□ 11.7
CTSD-208ENST00000636843 TRAV36DV7A0A075B6V5 113 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 ARPC4-TTLL3A0A0A6YYG9 625 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 LOC100289279A0A1B0GTE1 492 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 SLC35F4A4IF30 521 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 BLOC1S5-TXNDC5H3BN57 136 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 GABRPO00591 440 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 PLPP2O43688 288 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 RGS9O75916 674 aaPredicted RBP10.92□□□□□ -0.66
CTSD-208ENST00000636843 HOXB1P14653 301 aaPredicted RBP10.92□□□□□ -0.66
CTSD-208ENST00000636843 SDHAP31040 664 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 AQP2P41181 271 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 P2RY4P51582 365 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 SLC25A1P53007 311 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 CTXN1P60606 82 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 ACTA2P62736 377 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 ERVK-25P63136 954 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 ACTG2P63267 376 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 ZNF85Q03923 595 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 HSF2Q03933 536 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 OXA1LQ15070 435 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 KRTAP24-1Q3LI83 254 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 ALG10Q5BKT4 473 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 CREB3L2Q70SY1 520 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 NANOGNBQ7Z5D8 188 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 JAZF1Q86VZ6 243 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 FAM169BQ8N8A8 192 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 ZFP41Q8N8Y5 198 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 MOSPD2Q8NHP6 518 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 STK35Q8TDR2 534 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 BCL2L2Q92843 193 aaPredicted RBP10.92□□□□□ -0.66
CTSD-208ENST00000636843 MOGAT1Q96PD6 335 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 TBX5Q99593 518 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 VRK1Q99986 396 aaPredicted RBP10.92□□□□□ -0.66
CTSD-208ENST00000636843 TMED9Q9BVK6 235 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 CA10Q9NS85 328 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 ADAM18Q9Y3Q7 739 aa10.92□□□□□ -0.66
CTSD-208ENST00000636843 CTDSP2O14595 271 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 GLCEO94923 617 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 BGLAPP02818 100 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 GYPBP06028 91 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 MRPL3P09001 348 aaKnown RBP10.91□□□□□ -0.66
CTSD-208ENST00000636843 SPI1P17947 270 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 HNF1AP20823 631 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 CFL1P23528 166 aaKnown RBP10.91□□□□□ -0.66
CTSD-208ENST00000636843 TNFSF8P32971 234 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 SDC2P34741 201 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 SELENOPP49908 381 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 IFITM3Q01628 133 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 HNRNPA0Q13151 305 aaKnown RBP10.91□□□□□ -0.66
CTSD-208ENST00000636843 EFNB3Q15768 340 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 C1orf140Q5VVS0 124 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 GPR139Q6DWJ6 353 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 ANKRD16Q6P6B7 361 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 VASH1Q7L8A9 365 aaPredicted RBP10.91□□□□□ -0.66
CTSD-208ENST00000636843 FAM122BQ7Z309 247 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 SLC35F2Q8IXU6 374 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 SYS1Q8N2H4 156 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 MSI2Q96DH6 328 aaKnown RBP10.91□□□□□ -0.66
CTSD-208ENST00000636843 KTI12Q96EK9 354 aaPredicted RBP10.91□□□□□ -0.66
CTSD-208ENST00000636843 FOXN4Q96NZ1 517 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 NMNAT3Q96T66 252 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 CCDC32Q9BV29 185 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 LINC00470Q9BZP3 86 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 CMAHPQ9Y471 501 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 MALRD1Q5VYJ5 2156 aa10.91□□□□□ -0.66
CTSD-208ENST00000636843 TEX13CA0A0J9YWL9 993 aa10.9□□□□□ -0.66
CTSD-208ENST00000636843 A0A1W2PQL4 384 aaPredicted RBP10.9□□□□□ -0.66
CTSD-208ENST00000636843 OR6C68A6NDL8 312 aa10.9□□□□□ -0.66
CTSD-208ENST00000636843 VSTM5A8MXK1 200 aa10.9□□□□□ -0.66
CTSD-208ENST00000636843 MAGEB3O15480 346 aa10.9□□□□□ -0.66
CTSD-208ENST00000636843 RGS5O15539 181 aa10.9□□□□□ -0.66
CTSD-208ENST00000636843 NPIPB7O75200 414 aa10.9□□□□□ -0.66
CTSD-208ENST00000636843 IGLV1-44P01699 117 aa10.9□□□□□ -0.66
CTSD-208ENST00000636843 OR4A8P0C604 315 aa10.9□□□□□ -0.66
CTSD-208ENST00000636843 PPOXP50336 477 aa10.9□□□□□ -0.66
CTSD-208ENST00000636843 NAAAQ02083 359 aa10.9□□□□□ -0.66
CTSD-208ENST00000636843 MXD1Q05195 221 aa10.9□□□□□ -0.66
CTSD-208ENST00000636843 RPL18Q07020 188 aaKnown RBP10.9□□□□□ -0.66
CTSD-208ENST00000636843 KRR1Q13601 381 aaKnown RBP10.9□□□□□ -0.66
CTSD-208ENST00000636843 ADIPOQQ15848 244 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms