RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 JMJD6Q6NYC1 403 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 OR2W3Q7Z3T1 314 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 OR1S2Q8NGQ3 325 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 OR6K3Q8NGY3 331 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 ST6GALNAC5Q9BVH7 336 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 PBOV1Q9GZY1 135 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 AKIRIN1Q9H9L7 192 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 RNF222A6NCQ9 220 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 DISC1C4P0D8 188 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 EFNA2O43921 213 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 RPA2P15927 270 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 OR3A4PP47883 348 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 EMP2P54851 167 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 H1FNTQ75WM6 255 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 OR52H1Q8NGJ2 320 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 CPNE2Q96FN4 548 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 FN3KRPQ9HA64 309 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 FSCN3Q9NQT6 498 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 GSKIPQ9P0R6 139 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF319Q9P2F9 582 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 MMACHCQ9Y4U1 282 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF814B7Z6K7 855 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 KRBOX1C9JBD0 128 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 HCKP08631 526 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 HSD11B1P28845 292 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 IKZF1Q13422 519 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 GLIPR1L1Q6UWM5 242 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 OR10S1Q8NGN2 331 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 ASB10Q8WXI3 467 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 OR5B2Q96R09 309 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 CCNL2Q96S94 520 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 SLC25A21Q9BQT8 299 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 SLC22A11Q9NSA0 550 aa12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 GPN3Q9UHW5 284 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-228ENST00000636610 AHCTF1Q8WYP5 2266 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 NCOA6Q14686 2063 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 C9orf170A2RU37 121 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 OR14I1A6ND48 311 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 FTCDNL1E5RQL4 147 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 GPR31O00270 319 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF93P35789 620 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 SERPINF1P36955 418 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 PNLIPRP2P54317 469 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 CDCP2Q5VXM1 449 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 RAB12Q6IQ22 244 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 SMRP1Q8NCR6 262 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 DCUN1D4Q92564 292 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 LIN37Q96GY3 246 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 KLHL13Q9P2N7 655 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 TMEM131Q92545 1883 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 TRBV11-1A0A0K0K1C0 115 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 BLACEA4D250 179 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 LILRA5A6NI73 299 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 MASP2O00187 686 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 OR2T1O43869 369 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF20P17024 532 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF260Q3ZCT1 412 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 FDX2Q6P4F2 183 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF813Q6ZN06 617 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 HDDC2Q7Z4H3 204 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 INO80EQ8NBZ0 244 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 OR1M1Q8NGA1 313 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 LHFPL5Q8TAF8 219 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 THAP6Q8TBB0 222 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 ELP5Q8TE02 316 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 TMED6Q8WW62 240 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 PCDHB10Q9UN67 800 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 CSAG2Q9Y5P2 127 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 CACNA1EQ15878 2313 aa12.47□□□□□ -0.41
CACNA1A-228ENST00000636610 CRTAPO75718 401 aaPredicted RBP12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 GLI4P10075 376 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 SRSF3P84103 164 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 TMEM244Q5VVB8 128 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 FAM57BQ71RH2 274 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 OR10G3Q8NGC4 313 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 OR4K15Q8NH41 348 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 SLC39A1Q9NY26 324 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 IGHV3-15A0A0B4J1V0 119 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 LMO7DNF2Z398 122 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 TOR1AO14656 332 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 AGPAT2O15120 278 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 SRSF10O75494 262 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 MGMTP16455 207 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 CLRN1P58418 232 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 HNRNPKP61978 463 aaKnown RBP eCLIP12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 MYBPHQ13203 477 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF169Q14929 603 aaPredicted RBP12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 CLVS2Q5SYC1 327 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 ZNF704Q6ZNC4 412 aaPredicted RBP12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 LYG2Q86SG7 212 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 KCNK17Q96T54 332 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 PARP12Q9H0J9 701 aaKnown RBP12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 ACKR4Q9NPB9 350 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 GPR84Q9NQS5 396 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 SERINC1Q9NRX5 453 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 TNFSF18Q9UNG2 199 aa12.46□□□□□ -0.41
CACNA1A-228ENST00000636610 A0A1B0GX78 115 aa12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 H3BMH7 237 aa12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 ZNF208O43345 1280 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms