RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 SSX4O60224 188 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 F12P00748 615 aaPredicted RBP13.24□□□□□ -0.29
CLN6-211ENST00000635754 SBK2P0C263 348 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 NAT2P11245 290 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 RAC2P15153 192 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 ATP6V1E1P36543 226 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 CX3CR1P49238 355 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 PSG7Q13046 419 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 TTC23Q5W5X9 447 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 LRRN1Q6UXK5 716 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 FBXW12Q6X9E4 464 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 WFDC11Q8NEX6 87 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 CYGBQ8WWM9 190 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 NEU4Q8WWR8 484 aaPredicted RBP13.24□□□□□ -0.29
CLN6-211ENST00000635754 CMBLQ96DG6 245 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 SP140LQ9H930 580 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 CLN6Q9NWW5 311 aa13.24□□□□□ -0.29
CLN6-211ENST00000635754 ENTPD6O75354 484 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 ANXA2P07355 339 aaKnown RBP13.23□□□□□ -0.29
CLN6-211ENST00000635754 SLC2A1P11166 492 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 LIPAP38571 399 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 MTNR1AP48039 350 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 HLXQ14774 488 aaPredicted RBP13.23□□□□□ -0.29
CLN6-211ENST00000635754 CLEC12BQ2HXU8 276 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 SNAI3Q3KNW1 292 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 ZMAT1Q5H9K5 638 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 TMEM255AQ5JRV8 349 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 DHRSXQ8N5I4 330 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 HAVCR1Q96D42 359 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 Q96MF0 132 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 Q96MT0 163 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 MROQ9BYG7 248 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 NIPAL2Q9H841 368 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 CYSLTR2Q9NS75 346 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 CELSR1Q9NYQ6 3014 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 PURGQ9UJV8 347 aaKnown RBP13.23□□□□□ -0.29
CLN6-211ENST00000635754 COPS3Q9UNS2 423 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 LRP12Q9Y561 859 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 N6AMT1Q9Y5N5 214 aa13.23□□□□□ -0.29
CLN6-211ENST00000635754 C17orf100A8MU93 164 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 ZNF670-ZNF695F2Z2N8 137 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 LY6HO94772 140 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 GABRB1P18505 474 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 KITLGP21583 273 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 ZNF81P51508 661 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 MMP15P51511 669 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 CXCR4P61073 352 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 IL5RAQ01344 420 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 GK2Q14410 553 aaPredicted RBP13.22□□□□□ -0.29
CLN6-211ENST00000635754 PCGF3Q3KNV8 242 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 DEGS2Q6QHC5 323 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 CLEC2AQ6UVW9 174 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 MRPL21Q7Z2W9 205 aaKnown RBP13.22□□□□□ -0.29
CLN6-211ENST00000635754 TGIF2LYQ8IUE0 185 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 SETD9Q8NE22 299 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 RHOXF1Q8NHV9 184 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 TTTY10Q9BZA0 68 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 MYOZ1Q9NP98 299 aaPredicted RBP13.22□□□□□ -0.29
CLN6-211ENST00000635754 AASSQ9UDR5 926 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 IKZF2Q9UKS7 526 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 CHD3Q12873 2000 aaKnown RBP13.22□□□□□ -0.29
CLN6-211ENST00000635754 PSMD9O00233 223 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 TBX1O43435 398 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 XRCC2O43543 280 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 ZNF254O75437 659 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 APOL3O95236 402 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 CSF3P09919 207 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 OR2T7P0C7T2 308 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 SELEP16581 610 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 ZNF121P58317 390 aaPredicted RBP13.22□□□□□ -0.29
CLN6-211ENST00000635754 DSCR9P59020 149 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 PSMA6P60900 246 aaKnown RBP13.22□□□□□ -0.29
CLN6-211ENST00000635754 ROM1Q03395 351 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 GLYATL3Q5SZD4 288 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 ZNF691Q5VV52 312 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 ZNF322Q6U7Q0 402 aaPredicted RBP13.22□□□□□ -0.29
CLN6-211ENST00000635754 USP51Q70EK9 711 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 PGAP1Q75T13 922 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 ZNF679Q8IYX0 411 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 RFLNBQ8N5W9 214 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 ZNF525Q8N782 197 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 OR52H1Q8NGJ2 320 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 OR2T27Q8NH04 317 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 OR2AE1Q8NHA4 323 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 RNFT2Q96EX2 444 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 OR8B4Q96RC9 309 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 TBX5Q99593 518 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 ADI1Q9BV57 179 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 OPA3Q9H6K4 179 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 BRD7Q9NPI1 651 aa13.22□□□□□ -0.29
CLN6-211ENST00000635754 FLNAP21333 2647 aaKnown RBP13.21□□□□□ -0.29
CLN6-211ENST00000635754 ZSCAN5BA6NJL1 495 aa13.21□□□□□ -0.3
CLN6-211ENST00000635754 CLIC3O95833 236 aa13.21□□□□□ -0.3
CLN6-211ENST00000635754 CAPGP40121 348 aa13.21□□□□□ -0.3
CLN6-211ENST00000635754 RIDAP52758 137 aaKnown RBP13.21□□□□□ -0.3
CLN6-211ENST00000635754 ACTC1P68032 377 aa13.21□□□□□ -0.3
CLN6-211ENST00000635754 ACTA1P68133 377 aa13.21□□□□□ -0.3
CLN6-211ENST00000635754 ADARB1P78563 741 aaKnown RBP13.21□□□□□ -0.3
CLN6-211ENST00000635754 IL18R1Q13478 541 aa13.21□□□□□ -0.3
CLN6-211ENST00000635754 TIGD6Q17RP2 521 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms