RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ZNF44P15621 663 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ABOP16442 354 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 HNF1AP20823 631 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CXCR2P25025 360 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 RPA3P35244 121 aaPredicted RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CAPGP40121 348 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 RFC3P40938 356 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 POU3F4P49335 361 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CYB561P49447 251 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ATP4BP51164 291 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF136P52737 540 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 PLA2G16P53816 162 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 MFAP2P55001 183 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CDKN2DP55273 166 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 AP1S2P56377 157 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 IRX1P78414 480 aaPredicted RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 BTG2P78543 158 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 PJVKQ0ZLH3 352 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CAPRIN1Q14444 709 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ATXN7L3Q14CW9 347 aaPredicted RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 GUSBP1Q15486 140 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 NSDHLQ15738 373 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 SYPL1Q16563 259 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 NDUFA9Q16795 377 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 PCK2Q16822 640 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 KCTD19Q17RG1 926 aaPredicted RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 C17orf58Q2M2W7 97 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 DEFB113Q30KQ7 82 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF791Q3KP31 576 aaPredicted RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 DEFB134Q4QY38 66 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 DCST2Q5T1A1 773 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 C9orf66Q5T8R8 295 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 SEL1L2Q5TEA6 688 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 FAM219BQ5XKK7 198 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 PTRHD1Q6GMV3 140 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC25A25Q6KCM7 469 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 NIPAL1Q6NVV3 410 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 FAAP20Q6NZ36 180 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 C16orf47Q6ZP98 133 aaPredicted RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 BIVMQ86UB2 503 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 RPS19BP1Q86WX3 136 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CDC20BQ86Y33 519 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 C9orf40Q8IXQ3 194 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CPNE9Q8IYJ1 553 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CYP4Z2PQ8N1L4 340 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CA13Q8N1Q1 262 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 TMEM251Q8N6I4 163 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF321PQ8N8H1 164 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 EIF1ADQ8N9N8 165 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 DNAAF3Q8N9W5 541 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 SYT14Q8NB59 555 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 WFDC11Q8NEX6 87 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 B3GNT7Q8NFL0 401 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 OR8K3Q8NH51 312 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 PAQR8Q8TEZ7 354 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CA5BP1Q8WTZ4 195 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 FAM222BQ8WU58 562 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ANKRD7Q92527 254 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 EMG1Q92979 244 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 NEIL2Q969S2 332 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 RERGQ96A58 199 aaPredicted RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 MS4A6EQ96DS6 147 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 WDR34Q96EX3 536 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC41A3Q96GZ6 507 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 LINC00479Q96M42 142 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 FOPNLQ96NB1 174 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 PRAP1Q96NZ9 151 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 SERPINB12Q96P63 405 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ZBTB18Q99592 522 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 GPR21Q99679 349 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 SMR3AQ99954 134 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CHCHD5Q9BSY4 110 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CCDC28BQ9BUN5 200 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF717Q9BY31 904 aaPredicted RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 PCBD2Q9H0N5 130 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 RHOJQ9H4E5 214 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 EHD1Q9H4M9 534 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ELOVL3Q9HB03 270 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ANKHQ9HCJ1 492 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ADAP2Q9NPF8 381 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 DCAF16Q9NXF7 216 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 UTP6Q9NYH9 597 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 MRPL39Q9NYK5 338 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 PAK5Q9P286 719 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CTSZQ9UBR2 303 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 MMACHCQ9Y4U1 282 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 GMPPBQ9Y5P6 360 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 CHCHD2Q9Y6H1 151 aaPredicted RBP1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 MPDZO75970 2070 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.95□□□□□ -2.11e-6■■■□□ 18.1
SMARCB1-208ENST00000634926 PRR14LQ5THK1 2151 aa1.95□□□□□ -2.1
SMARCB1-208ENST00000634926 ABCA1O95477 2261 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 YLPM1P49750 1951 aaKnown RBP1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 RTTNQ86VV8 2226 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 NOTCH1P46531 2555 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 IGHV3OR16-12A0A075B7B8 117 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 IGHV3OR16-10A0A075B7F0 116 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 IGHV3-16A0A0C4DH30 117 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 TRBV11-1A0A0K0K1C0 115 aa1.94□□□□□ -2.1
SMARCB1-208ENST00000634926 FAM74A7A6NL05 159 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms