RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 SFTPDP35247 375 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 RPS27P42677 84 aaKnown RBP6.36□□□□□ -1.39
BRCA1-230ENST00000634433 KIR3DL2P43630 455 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 SOX2P48431 317 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 P2RY4P51582 365 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 ZMYND11Q15326 602 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 INPP5JQ15735 1006 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-230ENST00000634433 WDR38Q5JTN6 314 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 TMEM244Q5VVB8 128 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 RAET1LQ5VY80 246 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 TIPARPQ7Z3E1 657 aaKnown RBP6.36□□□□□ -1.39
BRCA1-230ENST00000634433 DCXRQ7Z4W1 244 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 GPAT4Q86UL3 456 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 MCEMP1Q8IX19 187 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 NOXO1Q8NFA2 376 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 OR5M1Q8NGP8 315 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 OR2AJ1Q8NGZ0 328 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 HSD17B8Q92506 261 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 TMEM106AQ96A25 262 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 S100A16Q96FQ6 103 aaKnown RBP6.36□□□□□ -1.39
BRCA1-230ENST00000634433 JSRP1Q96MG2 331 aaPredicted RBP6.36□□□□□ -1.39
BRCA1-230ENST00000634433 FOXN4Q96NZ1 517 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 IP6K3Q96PC2 410 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 C7orf50Q9BRJ6 194 aaKnown RBP6.36□□□□□ -1.39
BRCA1-230ENST00000634433 C1orf198Q9H425 327 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 NIPAL2Q9H841 368 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 RNF121Q9H920 327 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 ABI3Q9P2A4 366 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 FOXJ3Q9UPW0 622 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 DHDHQ9UQ10 334 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 MRPS18CQ9Y3D5 142 aaKnown RBP6.36□□□□□ -1.39
BRCA1-230ENST00000634433 STRAPQ9Y3F4 350 aaKnown RBP6.36□□□□□ -1.39
BRCA1-230ENST00000634433 CBY1Q9Y3M2 126 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 LRP12Q9Y561 859 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 WDR87Q6ZQQ6 2873 aa6.36□□□□□ -1.39
BRCA1-230ENST00000634433 MEGF11A6BM72 1044 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 KLK10O43240 276 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 GSTZ1O43708 216 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-230ENST00000634433 ZIC3O60481 467 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 SLC43A1O75387 559 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 PGA4P0DJD7 388 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 PGA3P0DJD8 388 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 ACHEP22303 614 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 TCEA1P23193 301 aaKnown RBP6.35□□□□□ -1.39
BRCA1-230ENST00000634433 EIF2B2P49770 351 aaKnown RBP6.35□□□□□ -1.39
BRCA1-230ENST00000634433 MRPS10P82664 201 aaKnown RBP6.35□□□□□ -1.39
BRCA1-230ENST00000634433 ACER2Q5QJU3 275 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 HES5Q5TA89 166 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 BEND4Q6ZU67 534 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 RHOUQ7L0Q8 258 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 LRRTM1Q86UE6 522 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 SERPINA12Q8IW75 414 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 OR5H6Q8NGV6 325 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 RNF133Q8WVZ7 376 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 C11orf40Q8WZ69 217 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 MCHR2Q969V1 340 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 PNPLA2Q96AD5 504 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 GNRHR2Q96P88 292 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 NEDD4LQ96PU5 975 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 AMELYQ99218 206 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 VRK1Q99986 396 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-230ENST00000634433 ABCG5Q9H222 651 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 TMEM185BQ9H7F4 350 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 PROK2Q9HC23 129 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 ING1Q9UK53 422 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-230ENST00000634433 HHLA2Q9UM44 414 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 ALPK2Q86TB3 2170 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 EP300Q09472 2414 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-230ENST00000634433 BAHCC1Q9P281 2608 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 MEIOCA2RUB1 952 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 OR2M5A3KFT3 312 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 C9orf172C9J069 976 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 TEX46H3BTG2 121 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 CDK2AP1O14519 115 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 TRAF3IP2O43734 574 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-230ENST00000634433 OR2C1O95371 312 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 TK1P04183 234 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 ISG15P05161 165 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 UBCP0CG48 685 aaKnown RBP6.35□□□□□ -1.39
BRCA1-230ENST00000634433 TNFRSF1AP19438 455 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 CFPP27918 469 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 CYB561P49447 251 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 ART1P52961 327 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 RPS18P62269 152 aaKnown RBP6.35□□□□□ -1.39
BRCA1-230ENST00000634433 FMODQ06828 376 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 KCNMB1Q16558 191 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 RSBN1Q5VWQ0 802 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-230ENST00000634433 GLT8D1Q68CQ7 371 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 SLC25A47Q6Q0C1 308 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 SYT9Q86SS6 491 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 LGALS14Q8TCE9 139 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 EMC6Q9BV81 110 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 STEAP1Q9UHE8 339 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 CYB5R1Q9UHQ9 305 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 OR52A1Q9UKL2 312 aa6.35□□□□□ -1.39
BRCA1-230ENST00000634433 TPRP12270 2363 aaKnown RBP6.35□□□□□ -1.39
BRCA1-230ENST00000634433 MAP1BP46821 2468 aaKnown RBP6.34□□□□□ -1.39
BRCA1-230ENST00000634433 A0A1B0GTH9 108 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 TMEM269A0A1B0GVZ9 245 aa6.34□□□□□ -1.39
BRCA1-230ENST00000634433 A0A1W2PN81 502 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms