RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 SP140LQ9H930 580 aa16.2■□□□□ 0.18
MECP2-216ENST00000627864 GNG8Q9UK08 70 aa16.2■□□□□ 0.18
MECP2-216ENST00000627864 DIMT1Q9UNQ2 313 aaKnown RBP16.2■□□□□ 0.18
MECP2-216ENST00000627864 TPRKBQ9Y3C4 175 aa16.2■□□□□ 0.18
MECP2-216ENST00000627864 DCHS2Q6V1P9 2916 aa16.2■□□□□ 0.18
MECP2-216ENST00000627864 C5orf63A6NC05 138 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 J3QLW9 94 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 TBX1O43435 398 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 SULT1C4O75897 302 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 CCDC159P0C7I6 412 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 ZNF19P17023 458 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 DCTDP32321 178 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 TTKP33981 857 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 SERPINF1P36955 418 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 ETV1P50549 477 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 MVKQ03426 396 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 SNAI3Q3KNW1 292 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 CDONQ4KMG0 1287 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 FAM220AQ7Z4H9 259 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 MARS2Q96GW9 593 aaKnown RBP16.19■□□□□ 0.18
MECP2-216ENST00000627864 PGAM5Q96HS1 289 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 MYCBPQ99417 103 aaPredicted RBP16.19■□□□□ 0.18
MECP2-216ENST00000627864 JAM3Q9BX67 310 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 LIME1Q9H400 295 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 FAIMQ9NVQ4 179 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 FKBP14Q9NWM8 211 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 DUSP13Q9UII6 198 aa16.19■□□□□ 0.18
MECP2-216ENST00000627864 EXOSC1Q9Y3B2 195 aaKnown RBP16.19■□□□□ 0.18
MECP2-216ENST00000627864 CELSR2Q9HCU4 2923 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 TMEM269A0A1B0GVZ9 245 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 J3QW42 95 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 ATE1O95260 518 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 TACSTD2P09758 323 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 LIMS3P0CW19 117 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 LIMS4P0CW20 117 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 MYL12AP19105 171 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 TUBG1P23258 451 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 ANOS1P23352 680 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 GCH1P30793 250 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 MPV17P39210 176 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 OR12D2P58182 307 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 PSMA6P60900 246 aaKnown RBP16.18■□□□□ 0.18
MECP2-216ENST00000627864 ACTA2P62736 377 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 ACTG2P63267 376 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 MALLQ13021 153 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 ZNF829Q3KNS6 432 aaPredicted RBP16.18■□□□□ 0.18
MECP2-216ENST00000627864 RBM48Q5RL73 367 aaKnown RBP16.18■□□□□ 0.18
MECP2-216ENST00000627864 AGAP6Q5VW22 663 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 LIPNQ5VXI9 398 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 C20orf204Q6ZNR8 217 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 KCTD20Q7Z5Y7 419 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 LRP11Q86VZ4 500 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 MUC15Q8N387 334 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 SYNPRQ8TBG9 265 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 KLF14Q8TD94 323 aaPredicted RBP16.18■□□□□ 0.18
MECP2-216ENST00000627864 MYDGFQ969H8 173 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 MRPL24Q96A35 216 aaKnown RBP16.18■□□□□ 0.18
MECP2-216ENST00000627864 SYT3Q9BQG1 590 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 ZNF649Q9BS31 505 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 MRPL37Q9BZE1 423 aaKnown RBP16.18■□□□□ 0.18
MECP2-216ENST00000627864 PLK3Q9H4B4 646 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 TUBG2Q9NRH3 451 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 CHCHD3Q9NX63 227 aaKnown RBP16.18■□□□□ 0.18
MECP2-216ENST00000627864 GTF2A1LQ9UNN4 478 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 LRRC42Q9Y546 428 aa16.18■□□□□ 0.18
MECP2-216ENST00000627864 CLPTM1O96005 669 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 DANCRP0C864 163 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 ZNF250P15622 560 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 CRHBPP24387 322 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 PSMB10P40306 273 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 SELENOVP59797 346 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 MFGE8Q08431 387 aaPredicted RBP16.17■□□□□ 0.18
MECP2-216ENST00000627864 HLXQ14774 488 aaPredicted RBP16.17■□□□□ 0.18
MECP2-216ENST00000627864 PRSS45Q7RTY3 260 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 CMBLQ96DG6 245 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 C4orf36Q96KX1 117 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 OR10A2Q9H208 303 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 ISG20L2Q9H9L3 353 aaKnown RBP16.17■□□□□ 0.18
MECP2-216ENST00000627864 FAM206AQ9NX38 181 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 ERVK-18Q9QC07 812 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 LAMP3Q9UQV4 416 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 R4GMQ9 66 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 CHD3Q12873 2000 aaKnown RBP16.17■□□□□ 0.18
MECP2-216ENST00000627864 SPG11Q96JI7 2443 aa16.17■□□□□ 0.18
MECP2-216ENST00000627864 ACOD1A6NK06 481 aa16.16■□□□□ 0.18
MECP2-216ENST00000627864 LOC110117498-PIK3R3F6TDL0 507 aa16.16■□□□□ 0.18
MECP2-216ENST00000627864 SRSF10O75494 262 aaKnown RBP16.16■□□□□ 0.18
MECP2-216ENST00000627864 PNPP00491 289 aa16.16■□□□□ 0.18
MECP2-216ENST00000627864 CDK1P06493 297 aa16.16■□□□□ 0.18
MECP2-216ENST00000627864 SOD3P08294 240 aa16.16■□□□□ 0.18
MECP2-216ENST00000627864 C21orf33P30042 268 aaPredicted RBP16.16■□□□□ 0.18
MECP2-216ENST00000627864 KLF3P57682 345 aaPredicted RBP16.16■□□□□ 0.18
MECP2-216ENST00000627864 GLYATL3Q5SZD4 288 aa16.16■□□□□ 0.18
MECP2-216ENST00000627864 SYS1Q8N2H4 156 aa16.16■□□□□ 0.18
MECP2-216ENST00000627864 OR52H1Q8NGJ2 320 aa16.16■□□□□ 0.18
MECP2-216ENST00000627864 OR2AE1Q8NHA4 323 aa16.16■□□□□ 0.18
MECP2-216ENST00000627864 SGCDQ92629 289 aa16.16■□□□□ 0.18
MECP2-216ENST00000627864 PPP1R14AQ96A00 147 aa16.16■□□□□ 0.18
MECP2-216ENST00000627864 SIGLEC11Q96RL6 698 aa16.16■□□□□ 0.18
MECP2-216ENST00000627864 PBOV1Q9GZY1 135 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms