RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 ASB17Q8WXJ9 295 aa17.36■□□□□ 0.37
PTCD3-220ENST00000627371 AASSQ9UDR5 926 aa17.36■□□□□ 0.37
PTCD3-220ENST00000627371 CGGBP1Q9UFW8 167 aaPredicted RBP17.36■□□□□ 0.37
PTCD3-220ENST00000627371 SNTNA6NMZ2 147 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 ERCC1P07992 297 aaPredicted RBP17.35■□□□□ 0.37
PTCD3-220ENST00000627371 NAT2P11245 290 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 RAC2P15153 192 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 KITLGP21583 273 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 MTNR1AP48039 350 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 ADARB1P78563 741 aaKnown RBP17.35■□□□□ 0.37
PTCD3-220ENST00000627371 ROM1Q03395 351 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 SNAI3Q3KNW1 292 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 ALKBH6Q3KRA9 238 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 ZNF691Q5VV52 312 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 DEGS2Q6QHC5 323 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 KRT77Q7Z794 578 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.35■□□□□ 0.37
PTCD3-220ENST00000627371 RFLNBQ8N5W9 214 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 WFDC11Q8NEX6 87 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 NRG4Q8WWG1 115 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 HAVCR1Q96D42 359 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 CMBLQ96DG6 245 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 Q96MT0 163 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 ADI1Q9BV57 179 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 TPK1Q9H3S4 243 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 NIPAL2Q9H841 368 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 PURGQ9UJV8 347 aaKnown RBP17.35■□□□□ 0.37
PTCD3-220ENST00000627371 LRP12Q9Y561 859 aa17.35■□□□□ 0.37
PTCD3-220ENST00000627371 PRR32B1ATL7 298 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 ZNF670-ZNF695F2Z2N8 137 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 TIMM8AO60220 97 aaPredicted RBP17.34■□□□□ 0.37
PTCD3-220ENST00000627371 F12P00748 615 aaPredicted RBP17.34■□□□□ 0.37
PTCD3-220ENST00000627371 MT-ND5P03915 603 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 SLC2A1P11166 492 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 ANOS1P23352 680 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 LIPAP38571 399 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 MMP15P51511 669 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 CXCR4P61073 352 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 MALLQ13021 153 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 RIPK1Q13546 671 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 HLXQ14774 488 aaPredicted RBP17.34■□□□□ 0.37
PTCD3-220ENST00000627371 APH1BQ8WW43 257 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 NEU4Q8WWR8 484 aaPredicted RBP17.34■□□□□ 0.37
PTCD3-220ENST00000627371 OR8B4Q96RC9 309 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 MROQ9BYG7 248 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 SP140LQ9H930 580 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 CYSLTR2Q9NS75 346 aa17.34■□□□□ 0.37
PTCD3-220ENST00000627371 PLSCR5A0PG75 271 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 C17orf100A8MU93 164 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 H0YAE9 185 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 SSX4O60224 188 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 ZNF254O75437 659 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 APOL3O95236 402 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 CLIC3O95833 236 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 ANXA2P07355 339 aaKnown RBP17.33■□□□□ 0.36
PTCD3-220ENST00000627371 OR2T7P0C7T2 308 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 ATP6V1E1P36543 226 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 CAPGP40121 348 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 ZNF121P58317 390 aaPredicted RBP17.33■□□□□ 0.36
PTCD3-220ENST00000627371 PSMA6P60900 246 aaKnown RBP17.33■□□□□ 0.36
PTCD3-220ENST00000627371 IL5RAQ01344 420 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 GK2Q14410 553 aaPredicted RBP17.33■□□□□ 0.36
PTCD3-220ENST00000627371 ZNF322Q6U7Q0 402 aaPredicted RBP17.33■□□□□ 0.36
PTCD3-220ENST00000627371 PRSS45Q7RTY3 260 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 ZNF679Q8IYX0 411 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 SETD9Q8NE22 299 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 OR2T27Q8NH04 317 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 RNFT2Q96EX2 444 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 TTTY10Q9BZA0 68 aa17.33■□□□□ 0.36
PTCD3-220ENST00000627371 C5orf63A6NC05 138 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 PSMD9O00233 223 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 LY6HO94772 140 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 ATP6V1G2O95670 118 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 DCTDP32321 178 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 ZNF81P51508 661 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 ZNF91Q05481 1191 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 EGR3Q06889 387 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 IL18R1Q13478 541 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 CLEC12BQ2HXU8 276 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 ZMAT1Q5H9K5 638 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 GLYATL3Q5SZD4 288 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 DNM1P46Q6ZS02 220 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 TGIF2LYQ8IUE0 185 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 OR10H4Q8NGA5 316 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 GTF3AQ92664 365 aaKnown RBP17.32■□□□□ 0.36
PTCD3-220ENST00000627371 Q96MF0 132 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 TBX5Q99593 518 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 IKZF2Q9UKS7 526 aa17.32■□□□□ 0.36
PTCD3-220ENST00000627371 FLNAP21333 2647 aaKnown RBP17.31■□□□□ 0.36
PTCD3-220ENST00000627371 A0A1W2PQL4 384 aaPredicted RBP17.31■□□□□ 0.36
PTCD3-220ENST00000627371 ZSCAN5BA6NJL1 495 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 H0YJX3 145 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 XRCC2O43543 280 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 WBP4O75554 376 aaKnown RBP17.31■□□□□ 0.36
PTCD3-220ENST00000627371 DBTP11182 482 aaKnown RBP17.31■□□□□ 0.36
PTCD3-220ENST00000627371 SELEP16581 610 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 RIDAP52758 137 aaKnown RBP17.31■□□□□ 0.36
PTCD3-220ENST00000627371 ZNF92Q03936 586 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 PCGF3Q3KNV8 242 aa17.31■□□□□ 0.36
PTCD3-220ENST00000627371 OR2T2Q6IF00 324 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms