RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ADIPOQQ15848 244 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 RSPO1Q2MKA7 263 aaPredicted RBP12.65□□□□□ -0.38
PNKP-221ENST00000627317 KLHL22Q53GT1 634 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 AGAP6Q5VW22 663 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 C1orf174Q8IYL3 243 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 MUC15Q8N387 334 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 FBLIM1Q8WUP2 373 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 PERPQ96FX8 193 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 MRPL48Q96GC5 212 aaKnown RBP12.65□□□□□ -0.38
PNKP-221ENST00000627317 COG8Q96MW5 612 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 OR8B4Q96RC9 309 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 DOK1Q99704 481 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 MROQ9BYG7 248 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 SLCO1C1Q9NYB5 712 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 EXOGQ9Y2C4 368 aaKnown RBP12.65□□□□□ -0.38
PNKP-221ENST00000627317 LRP12Q9Y561 859 aa12.65□□□□□ -0.38
PNKP-221ENST00000627317 C2CD3Q4AC94 2353 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 DAPL1A0PJW8 107 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 H3BSA7 217 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 FAM20BO75063 409 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 ZNF254O75437 659 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 NGFP01138 241 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 CD8AP01732 235 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 KRT8P05787 483 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 ANXA2P07355 339 aaKnown RBP12.64□□□□□ -0.39
PNKP-221ENST00000627317 GCH1P30793 250 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 SERPINF1P36955 418 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 RIDAP52758 137 aaKnown RBP12.64□□□□□ -0.39
PNKP-221ENST00000627317 SELENOVP59797 346 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 PSMA6P60900 246 aaKnown RBP12.64□□□□□ -0.39
PNKP-221ENST00000627317 ROM1Q03395 351 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 EGR3Q06889 387 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 ZNF718Q3SXZ3 478 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 DEGS2Q6QHC5 323 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 FAM220AQ7Z4H9 259 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 DTX2Q86UW9 622 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 ZNF679Q8IYX0 411 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 ACBD7Q8N6N7 88 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 OR5L1Q8NGL2 311 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 SLC25A40Q8TBP6 338 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 SNX33Q8WV41 574 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 MRPL24Q96A35 216 aaKnown RBP12.64□□□□□ -0.39
PNKP-221ENST00000627317 CNBD2Q96M20 576 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 C1QTNF5Q9BXJ0 243 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 PLK3Q9H4B4 646 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 SP140LQ9H930 580 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 FZR1Q9UM11 496 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 LAMP3Q9UQV4 416 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 N6AMT1Q9Y5N5 214 aa12.64□□□□□ -0.39
PNKP-221ENST00000627317 DSCAMO60469 2012 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 A0A1W2PPW3 197 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 EFCAB10A6NFE3 127 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 PRR32B1ATL7 298 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 SLC2A1P11166 492 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 TUBG1P23258 451 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 KLF3P57682 345 aaPredicted RBP12.63□□□□□ -0.39
PNKP-221ENST00000627317 ZNF121P58317 390 aaPredicted RBP12.63□□□□□ -0.39
PNKP-221ENST00000627317 SNRPD2P62316 118 aaKnown RBP12.63□□□□□ -0.39
PNKP-221ENST00000627317 MALLQ13021 153 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 ZNF829Q3KNS6 432 aaPredicted RBP12.63□□□□□ -0.39
PNKP-221ENST00000627317 PLEKHG7Q6ZR37 379 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 SSX6Q7RTT6 188 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 YIPF7Q8N8F6 280 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 BPIFB6Q8NFQ5 453 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 OR52I1Q8NGK6 324 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 SYNPRQ8TBG9 265 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 MYCBPQ99417 103 aaPredicted RBP12.63□□□□□ -0.39
PNKP-221ENST00000627317 SYT3Q9BQG1 590 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 TRAF4Q9BUZ4 470 aaPredicted RBP12.63□□□□□ -0.39
PNKP-221ENST00000627317 MRPL37Q9BZE1 423 aaKnown RBP12.63□□□□□ -0.39
PNKP-221ENST00000627317 OR2J1Q9GZK6 312 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 CXorf56Q9H5V9 222 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 BRD7Q9NPI1 651 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 TUBG2Q9NRH3 451 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 INPP5EQ9NRR6 644 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 CBLN4Q9NTU7 201 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 MRPS18AQ9NVS2 196 aaKnown RBP12.63□□□□□ -0.39
PNKP-221ENST00000627317 PTTG3PQ9NZH4 202 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 DUSP13Q9UII6 198 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 STARD10Q9Y365 291 aa12.63□□□□□ -0.39
PNKP-221ENST00000627317 B9A039 149 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 J3QRE1 110 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 TBX1O43435 398 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 XPNPEP2O43895 674 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 IGHA1P01876 353 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 ZNF250P15622 560 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 ACTA2P62736 377 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 ACTG2P63267 376 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 ZNF85Q03923 595 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 EFNB3Q15768 340 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 MSMPQ1L6U9 139 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 SNAI3Q3KNW1 292 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 C6orf141Q5SZD1 244 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 C11orf71Q6IPW1 123 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 LAIR2Q6ISS4 152 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 COLCA1Q6ZS62 124 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 FAM57BQ71RH2 274 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 NAA40Q86UY6 237 aa12.62□□□□□ -0.39
PNKP-221ENST00000627317 KLF14Q8TD94 323 aaPredicted RBP12.62□□□□□ -0.39
PNKP-221ENST00000627317 MARS2Q96GW9 593 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms