RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 C9orf40Q8IXQ3 194 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 OR5D18Q8NGL1 313 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 MITD1Q8WV92 249 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 TMEM41AQ96HV5 264 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 EDEM2Q9BV94 578 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 TWSG1Q9GZX9 223 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 LAT2Q9GZY6 243 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 CYB5R1Q9UHQ9 305 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 MKL2Q9ULH7 1088 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 SDCBPO00560 298 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-211ENST00000622020 VSIG8P0DPA2 414 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 ABOP16442 354 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 PSMB6P28072 239 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 YPEL5P62699 121 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 SCRN3Q0VDG4 424 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 TMEM104Q8NE00 496 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 SLC26A10Q8NG04 563 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 LRRC61Q9BV99 259 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 FANCFQ9NPI8 374 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 SPAG17Q6Q759 2223 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 SPTY2D1-AS1A0A0U1RR47 76 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 PLPP3O14495 311 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 MPIG6BO95866 241 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 RBM39Q14498 530 aaKnown RBP14.06□□□□□ -0.16
NPHP4-211ENST00000622020 IGSF11Q5DX21 431 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 FDX2Q6P4F2 183 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 CCDC36Q8IYA8 594 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 SVBPQ8N300 66 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 NPRL2Q8WTW4 380 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 ESRP2Q9H6T0 727 aaKnown RBP14.06□□□□□ -0.16
NPHP4-211ENST00000622020 SEC61A2Q9H9S3 476 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 ZNF629Q9UEG4 869 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-211ENST00000622020 H0YIZ8 118 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 SYT7O43581 403 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 AHSA1O95433 338 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 POU2F2P09086 479 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 SLC25A4P12235 298 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 PGCP20142 388 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 ANOS1P23352 680 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 RABIFP47224 123 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 KCNJ3P48549 501 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 ROM1Q03395 351 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 ZNF345Q14585 488 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 ZSCAN4Q8NAM6 433 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-211ENST00000622020 OR4K15Q8NH41 348 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 AQP3Q92482 292 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 ADIPOR1Q96A54 375 aa14.06□□□□□ -0.16
NPHP4-211ENST00000622020 ZNF217O75362 1048 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 GLAP06280 429 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 ID4P47928 161 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 SSBP1Q04837 148 aaKnown RBP14.05□□□□□ -0.16
NPHP4-211ENST00000622020 ZNF585AQ6P3V2 769 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 TMPRSS9Q7Z410 1059 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 ZNF248Q8NDW4 579 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 OR51F2Q8NH61 342 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 PIK3IP1Q96FE7 263 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 TCTN2Q96GX1 697 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 C5orf34Q96MH7 638 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 SLC46A1Q96NT5 459 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 LANCL2Q9NS86 450 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 OR5AC2Q9NZP5 309 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 FAM221BA6H8Z2 402 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 OR5K4A6NMS3 321 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 NPIPA5E9PKD4 350 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 LDLRAD4O15165 306 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 SOCS1O15524 211 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 CRHP06850 196 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 BCKDHBP21953 392 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 ABCD3P28288 659 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 S100A10P60903 97 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 MEF2DQ14814 521 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 ETV3LQ6ZN32 361 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 LANCL3Q6ZV70 420 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 NUBPLQ8TB37 319 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 OR51E1Q8TCB6 317 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 ZNF721Q8TF20 911 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 NPIPA1Q9UND3 350 aa14.05□□□□□ -0.16
NPHP4-211ENST00000622020 DDAH2O95865 285 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 GUSBP08236 651 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 MELTFP08582 738 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 MYF5P13349 255 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 EMP2P54851 167 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 DEFB133Q30KQ1 61 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 BAP18Q8IXM2 172 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 OR4A4PQ8NGN8 299 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 LMX1AQ8TE12 382 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 ST6GALNAC5Q9BVH7 336 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 TPSD1Q9BZJ3 242 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 SLCO5A1Q9H2Y9 848 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 PRAMEF26H0Y7S4 382 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 SSX5O60225 188 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 SERPINA5P05154 406 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 HOXB5P09067 269 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 CDAP32320 146 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 EBPQ15125 230 aaKnown RBP14.04□□□□□ -0.16
NPHP4-211ENST00000622020 SGCAQ16586 387 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 RSPO4Q2I0M5 234 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-211ENST00000622020 HFEQ30201 348 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 CCDC157Q569K6 752 aa14.04□□□□□ -0.16
NPHP4-211ENST00000622020 CARD17Q5XLA6 110 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms