RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TP53I11O14683 189 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 B3GALNT1O75752 331 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 AMY2AP04746 511 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 ZNF17P17021 662 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 CTSSP25774 331 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 S100A11P31949 105 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 ZNF133P52736 654 aaPredicted RBP8.35□□□□□ -1.07
PDPN-212ENST00000621990 GABREP78334 506 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 C4orf46Q504U0 113 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 LY6G6FQ5SQ64 297 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 PEAR1Q5VY43 1037 aaPredicted RBP8.35□□□□□ -1.07
PDPN-212ENST00000621990 C3P1Q6ZMU1 363 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 ZNF584Q8IVC4 421 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 UBALD2Q8IYN6 164 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 ACBD4Q8NC06 268 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 FAM46BQ96A09 425 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 IMMP1LQ96LU5 166 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 SLC6A7Q99884 636 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 ZNF700Q9H0M5 742 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 SH2D2AQ9NP31 389 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 VPS13AQ96RL7 3174 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 RAMP1O60894 148 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 SIX6O95475 246 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 CD8AP01732 235 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 UMODP07911 640 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 RPA2P15927 270 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 TBPP20226 339 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 GNALP38405 381 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 EIF1AXP47813 144 aaKnown RBP8.35□□□□□ -1.07
PDPN-212ENST00000621990 UBE2MP61081 183 aaKnown RBP8.35□□□□□ -1.07
PDPN-212ENST00000621990 RAB14P61106 215 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 SLC35A1P78382 337 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 EIF3IQ13347 325 aaKnown RBP8.35□□□□□ -1.07
PDPN-212ENST00000621990 HLXQ14774 488 aaPredicted RBP8.35□□□□□ -1.07
PDPN-212ENST00000621990 CLVS2Q5SYC1 327 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 OR2W3Q7Z3T1 314 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 GPAT4Q86UL3 456 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 FJX1Q86VR8 437 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 COMMD7Q86VX2 200 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 WDR5BQ86VZ2 330 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 NAXDQ8IW45 347 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 OR5AS1Q8N127 324 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 BPIFB2Q8N4F0 458 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 DTWD2Q8NBA8 298 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 OR4K17Q8NGC6 315 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 OR2AJ1Q8NGZ0 328 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 OR51E1Q8TCB6 317 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 SSC4DQ8WTU2 575 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 MRGPRFQ96AM1 343 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 C1orf147Q96MC9 270 aaPredicted RBP8.35□□□□□ -1.07
PDPN-212ENST00000621990 PRRT1Q99946 306 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 TMEM185BQ9H7F4 350 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 ZMAT3Q9HA38 289 aaKnown RBP8.35□□□□□ -1.07
PDPN-212ENST00000621990 MED9Q9NWA0 146 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 MYEF2Q9P2K5 600 aaKnown RBP8.35□□□□□ -1.07
PDPN-212ENST00000621990 ANAPC10Q9UM13 185 aa8.35□□□□□ -1.07
PDPN-212ENST00000621990 NTN3O00634 580 aaPredicted RBP8.34□□□□□ -1.07
PDPN-212ENST00000621990 IGLV3-1P01715 115 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 PDGFAP04085 211 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 COX6A1P12074 109 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 ZNF28P17035 718 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 ZNF43P17038 809 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 HLA-GP17693 338 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 CDAP32320 146 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 LPCAT3Q6P1A2 487 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 TMPPEQ6ZT21 453 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 FOXL2NBQ6ZUU3 175 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 TMUB2Q71RG4 321 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 PGAP1Q75T13 922 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 C12orf45Q8N5I9 185 aaPredicted RBP8.34□□□□□ -1.07
PDPN-212ENST00000621990 OR8B12Q8NGG6 310 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 IFI44Q8TCB0 444 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 ANGPTL4Q9BY76 406 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 B3GNT4Q9C0J1 378 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 FSCN3Q9NQT6 498 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 ASH2LQ9UBL3 628 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 EML6Q6ZMW3 1958 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 CCDC85CA6NKD9 419 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 DISC1C4P0D8 188 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 D6RAR5 112 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 ARPC5O15511 151 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 KLF7O75840 302 aaPredicted RBP8.34□□□□□ -1.07
PDPN-212ENST00000621990 CRYZL1O95825 349 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 FCER2P06734 321 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 QDPRP09417 244 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 ZNF93P35789 620 aaPredicted RBP8.34□□□□□ -1.07
PDPN-212ENST00000621990 ZNF121P58317 390 aaPredicted RBP8.34□□□□□ -1.07
PDPN-212ENST00000621990 GMFBP60983 142 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 LSM6P62312 80 aaKnown RBP8.34□□□□□ -1.07
PDPN-212ENST00000621990 OC90Q02509 493 aaPredicted RBP8.34□□□□□ -1.07
PDPN-212ENST00000621990 DHRS2Q13268 280 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 TRA2AQ13595 282 aaKnown RBP eCLIP8.34□□□□□ -1.07
PDPN-212ENST00000621990 EXT1Q16394 746 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 TMEM176BQ3YBM2 270 aaPredicted RBP8.34□□□□□ -1.07
PDPN-212ENST00000621990 C10orf128Q5T292 105 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 TRAPPC6BQ86SZ2 158 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 SLC25A42Q86VD7 318 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 ARMC10Q8N2F6 343 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 ZDHHC22Q8N966 263 aa8.34□□□□□ -1.07
PDPN-212ENST00000621990 OR13C9Q8NGT0 318 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms