RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 OR1J2Q8NGS2 313 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 FGFBP3Q8TAT2 258 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 GMPPAQ96IJ6 420 aaPredicted RBP18.79■□□□□ 0.6
SPAST-204ENST00000621856 WACQ9BTA9 647 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 RNF121Q9H920 327 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 STEAP1Q9UHE8 339 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 PRSS50Q9UI38 385 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 FREM1Q5H8C1 2179 aa18.79■□□□□ 0.6
SPAST-204ENST00000621856 TTLL8A6PVC2 850 aa18.78■□□□□ 0.6
SPAST-204ENST00000621856 OXA1LQ15070 435 aa18.78■□□□□ 0.6
SPAST-204ENST00000621856 DOK3Q7L591 496 aa18.78■□□□□ 0.6
SPAST-204ENST00000621856 ADGRE4PQ86SQ3 457 aa18.78■□□□□ 0.6
SPAST-204ENST00000621856 SERPINA12Q8IW75 414 aa18.78■□□□□ 0.6
SPAST-204ENST00000621856 PLPP7Q8NBV4 271 aa18.78■□□□□ 0.6
SPAST-204ENST00000621856 COX4I2Q96KJ9 171 aa18.78■□□□□ 0.6
SPAST-204ENST00000621856 CMTM3Q96MX0 182 aa18.78■□□□□ 0.6
SPAST-204ENST00000621856 WNT5BQ9H1J7 359 aa18.78■□□□□ 0.6
SPAST-204ENST00000621856 SLC17A5Q9NRA2 495 aa18.78■□□□□ 0.6
SPAST-204ENST00000621856 GLRX2Q9NS18 164 aa18.78■□□□□ 0.6
SPAST-204ENST00000621856 OR5V1Q9UGF6 321 aa18.78■□□□□ 0.6
SPAST-204ENST00000621856 A0A096LPE4 126 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 A0A0G2JMP0 313 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 A0A0X1KG70 313 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 A0A1W2PPZ6 126 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 MEGF11A6BM72 1044 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 CSF3P09919 207 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 CRYGSP22914 178 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 ANOS1P23352 680 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 FOXG1P55316 489 aaPredicted RBP18.77■□□□□ 0.6
SPAST-204ENST00000621856 SPOCK1Q08629 439 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 RIN1Q13671 783 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 RAB11BQ15907 218 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 DRAM2Q6UX65 266 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 Q8N402 240 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 OR4M2Q8NGB6 313 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 ADAT3Q96EY9 351 aaPredicted RBP18.77■□□□□ 0.6
SPAST-204ENST00000621856 LHX6Q9UPM6 363 aa18.77■□□□□ 0.6
SPAST-204ENST00000621856 A0A1W2PQ09 198 aa18.77■□□□□ 0.59
SPAST-204ENST00000621856 OR6C6A6NF89 314 aa18.77■□□□□ 0.59
SPAST-204ENST00000621856 MAGEB3O15480 346 aa18.77■□□□□ 0.59
SPAST-204ENST00000621856 SS18L1O75177 396 aaPredicted RBP18.77■□□□□ 0.59
SPAST-204ENST00000621856 PITPNBP48739 271 aa18.77■□□□□ 0.59
SPAST-204ENST00000621856 SLC36A2Q495M3 483 aa18.77■□□□□ 0.59
SPAST-204ENST00000621856 SFRP5Q5T4F7 317 aa18.77■□□□□ 0.59
SPAST-204ENST00000621856 OR51A2Q8NGJ7 313 aa18.77■□□□□ 0.59
SPAST-204ENST00000621856 ETV7Q9Y603 341 aa18.77■□□□□ 0.59
SPAST-204ENST00000621856 MED12LQ86YW9 2145 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 C5orf63A6NC05 138 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 E9PLN8 166 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 K7ENP7 123 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 MMP7P09237 267 aaPredicted RBP18.76■□□□□ 0.59
SPAST-204ENST00000621856 CCL1P22362 96 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 OR3A2P47893 321 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 SCN1BQ07699 218 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 TAB1Q15750 504 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 PLEKHN1Q494U1 663 aaPredicted RBP18.76■□□□□ 0.59
SPAST-204ENST00000621856 TRIQKQ629K1 86 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 INO80CQ6PI98 192 aaPredicted RBP18.76■□□□□ 0.59
SPAST-204ENST00000621856 CMTM4Q8IZR5 234 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 OR5D14Q8NGL3 314 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 SOX7Q9BT81 388 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 OR10A2Q9H208 303 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 LUZP4Q9P127 313 aa18.76■□□□□ 0.59
SPAST-204ENST00000621856 APC2O95996 2303 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 A0A0U1RQV5 110 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 SLC17A2O00624 439 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 CRYABP02511 175 aaKnown RBP18.75■□□□□ 0.59
SPAST-204ENST00000621856 DDOSTP39656 456 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 TBR1Q16650 682 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 PABPC1L2AQ5JQF8 200 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 FBXW9Q5XUX1 488 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 PYHIN1Q6K0P9 492 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 RPUSD3Q6P087 351 aaKnown RBP18.75■□□□□ 0.59
SPAST-204ENST00000621856 ZNF627Q7L945 461 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 GCNT2Q8N0V5 402 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 NKAIN3Q8N8D7 197 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 OR1M1Q8NGA1 313 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 ABHD17AQ96GS6 310 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 PLEKHA1Q9HB21 404 aa18.75■□□□□ 0.59
SPAST-204ENST00000621856 LINC00854A0A1B0GVQ3 168 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 OR14I1A6ND48 311 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 ITGA5P08648 1049 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 CFPP27918 469 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 BDKRB2P30411 391 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 BAIAP2L2Q6UXY1 529 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 JAGN1Q8N5M9 183 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 OR52H1Q8NGJ2 320 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 SYNPRQ8TBG9 265 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 SETD6Q8TBK2 473 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 SLC25A38Q96DW6 304 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 LYZL4Q96KX0 146 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 DKK4Q9UBT3 224 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 CGGBP1Q9UFW8 167 aaPredicted RBP18.74■□□□□ 0.59
SPAST-204ENST00000621856 TBC1D24Q9ULP9 559 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 ASPMQ8IZT6 3477 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 AHRRA9YTQ3 701 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 PTTG1O95997 202 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 ABOP16442 354 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 RAB3AP20336 220 aa18.74■□□□□ 0.59
SPAST-204ENST00000621856 MPGP29372 298 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms