RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 BMPR1BO00238 502 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 MRPL33O75394 65 aaKnown RBP6.56□□□□□ -1.36
COLCA1-205ENST00000620864 SCGB1A1P11684 91 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF26P17031 533 aaPredicted RBP6.56□□□□□ -1.36
COLCA1-205ENST00000620864 BMP5P22003 454 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 SHC1P29353 583 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 RPL29P47914 159 aaKnown RBP6.56□□□□□ -1.36
COLCA1-205ENST00000620864 PAX5Q02548 391 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 CLLU1OSQ5K130 101 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 MARCH8Q5T0T0 291 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 THEM4Q5T1C6 240 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 DHRS13Q6UX07 377 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 ZDHHC22Q8N966 263 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 FAM181AQ8N9Y4 354 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 OR4S1Q8NGB4 309 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 EDARADDQ8WWZ3 215 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 BCL2L2Q92843 193 aaPredicted RBP6.56□□□□□ -1.36
COLCA1-205ENST00000620864 NAT6Q93015 286 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 PIMREGQ9BSJ6 248 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 SMDT1Q9H4I9 107 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 GNB4Q9HAV0 340 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 PIRO00625 290 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 WDR1O75083 606 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 NRASP01111 189 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 HRASP01112 189 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 KRASP01116 189 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 CD14P08571 375 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 OR3A1P47881 315 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 POU3F1Q03052 451 aaPredicted RBP6.56□□□□□ -1.36
COLCA1-205ENST00000620864 SLC5A12Q1EHB4 618 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 ARRDC1Q8N5I2 433 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 SPICQ8N5J4 248 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 AAMDCQ9H7C9 122 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 AJAP1Q9UKB5 411 aaPredicted RBP6.56□□□□□ -1.36
COLCA1-205ENST00000620864 NDRG4Q9ULP0 352 aaKnown RBP6.56□□□□□ -1.36
COLCA1-205ENST00000620864 SNX11Q9Y5W9 270 aa6.56□□□□□ -1.36
COLCA1-205ENST00000620864 N4BP2Q86UW6 1770 aaPredicted RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 FAM74A7A6NL05 159 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 DEGS1O15121 323 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 BCAT2O15382 392 aaPredicted RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 SULT1A3P0DMM9 295 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 SULT1A4P0DMN0 295 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 HOXC13P31276 330 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 CSF2RBP32927 897 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 RAD52P43351 418 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 HIST3H3Q16695 136 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ATP6V1FQ16864 119 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 FAM209BQ5JX69 171 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 OR2G6Q5TZ20 316 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 TMEM123Q8N131 208 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 C11orf42Q8N5U0 333 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 PNPLA1Q8N8W4 532 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ZFP62Q8NB50 900 aaPredicted RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 NECAP1Q8NC96 275 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 OR51F2Q8NH61 342 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 SLC25A43Q8WUT9 341 aaPredicted RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 NEURL3Q96EH8 262 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ZCWPW2A0A1B0GU75 182 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 KDM4EB2RXH2 506 aaPredicted RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 H0YIV9 168 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 HOXC11O43248 304 aaPredicted RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 OR7C2O60412 319 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 GPR75O95800 540 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 OR5AL1P0C617 328 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 OR4E1P0C645 316 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 SRP9P49458 86 aaKnown RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 CTF1Q16619 201 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 TTC32Q5I0X7 151 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF573Q86YE8 665 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 RXFP4Q8TDU9 374 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 NEIL1Q96FI4 390 aaPredicted RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 GPR87Q9BY21 358 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 NXF2Q9GZY0 626 aaKnown RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 MMP24Q9Y5R2 645 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 HMSDA8MTL9 139 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF17P17021 662 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 TNFRSF1BP20333 461 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 CSNK1DP48730 415 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 EVX1P49640 407 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 MLF1P58340 268 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 RANBP10Q6VN20 620 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 LRP10Q7Z4F1 713 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF687Q8N1G0 1237 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 EXD3Q8N9H8 876 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 RTL8AQ9BWD3 113 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 GABARAPL3Q9BY60 117 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 OR1A1Q9P1Q5 309 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 TIMM9Q9Y5J7 89 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 TRAV1-2A0A0B4J238 106 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 TIMM8AO60220 97 aaPredicted RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 SSSCA1O60232 199 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 TTRP02766 147 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ZNF888P0CJ79 500 aaPredicted RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 HIST1H1TP22492 207 aaPredicted RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 ELAVL4P26378 380 aaKnown RBP6.55□□□□□ -1.36
COLCA1-205ENST00000620864 FAM26EQ8N5C1 309 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 FAM71CQ8NEG0 241 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 OR1L3Q8NH93 324 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 TTC9Q92623 222 aa6.55□□□□□ -1.36
COLCA1-205ENST00000620864 FYTTD1Q96QD9 318 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms