RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 PSMD8P48556 350 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 CEBPDP49716 269 aaPredicted RBP2.23□□□□□ -2.05
MALAT1-216ENST00000620465 LHX2P50458 406 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 TPMTP51580 245 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 TDGF1P3P51864 188 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 TPI1P60174 286 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 RHOAP61586 193 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 ERVK-25P63136 954 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 RPS21P63220 83 aaKnown RBP2.23□□□□□ -2.05
MALAT1-216ENST00000620465 ACVR1Q04771 509 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 ILKQ13418 452 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 EIF4EBP2Q13542 120 aaPredicted RBP2.23□□□□□ -2.05
MALAT1-216ENST00000620465 ZNF235Q14590 738 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 PSG5Q15238 335 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 SPA17Q15506 151 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 CST6Q15828 149 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 KLHL40Q2TBA0 621 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 ENPP6Q6UWR7 440 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 FAM183BPQ6ZVS7 135 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 H2AFVQ71UI9 128 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 CXorf40AQ8TE69 158 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 PYROXD1Q8WU10 500 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 RXFP2Q8WXD0 754 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 NTAN1Q96AB6 310 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 ISG20Q96AZ6 181 aaKnown RBP2.23□□□□□ -2.05
MALAT1-216ENST00000620465 HAUS1Q96CS2 278 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 C10orf35Q96D05 121 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 RNF185Q96GF1 192 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 CCDC42Q96M95 316 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 PPP1R2P1Q96PQ5 205 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 CCT7Q99832 543 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 C11orf70Q9BRQ4 267 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 PELOQ9BRX2 385 aaKnown RBP2.23□□□□□ -2.05
MALAT1-216ENST00000620465 SLC39A3Q9BRY0 314 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 SAMSN1Q9NSI8 373 aaKnown RBP2.23□□□□□ -2.05
MALAT1-216ENST00000620465 SLC25A37Q9NYZ2 338 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 CLCF1Q9UBD9 225 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 OR12D3Q9UGF7 316 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 HMGXB4Q9UGU5 601 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 VANGL2Q9ULK5 521 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 CLEC4AQ9UMR7 237 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 TRAPPC4Q9Y296 219 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 TNRC6BQ9UPQ9 1833 aaKnown RBP2.23□□□□□ -2.05
MALAT1-216ENST00000620465 SPTBN5Q9NRC6 3674 aaKnown RBP2.23□□□□□ -2.05
MALAT1-216ENST00000620465 APC2O95996 2303 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 CNTRLQ7Z7A1 2325 aa2.23□□□□□ -2.05
MALAT1-216ENST00000620465 SNTNA6NMZ2 147 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 SLC31A2O15432 143 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 RRP8O43159 456 aaKnown RBP2.22□□□□□ -2.05
MALAT1-216ENST00000620465 TIMM8AO60220 97 aaPredicted RBP2.22□□□□□ -2.05
MALAT1-216ENST00000620465 PALMO75781 387 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 LDOC1O95751 146 aaPredicted RBP2.22□□□□□ -2.05
MALAT1-216ENST00000620465 TSPAN12O95859 305 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 IGLV3-19P01714 112 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 IGLV3-27P01718 113 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 IGKV3-11P04433 115 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 PLEKP08567 350 aaPredicted RBP2.22□□□□□ -2.05
MALAT1-216ENST00000620465 HLA-EP13747 358 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 ADRB3P13945 408 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 RPS2P15880 293 aaKnown RBP2.22□□□□□ -2.05
MALAT1-216ENST00000620465 ZNF32P17041 273 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 PCK1P35558 622 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 HCAR3P49019 387 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 ARFIP1P53367 373 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 CDH6P55285 790 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 ACTR1AP61163 376 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 RPS24P62847 133 aaKnown RBP2.22□□□□□ -2.05
MALAT1-216ENST00000620465 GNA12Q03113 381 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 SCRN3Q0VDG4 424 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 TFDP2Q14188 446 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 PRPSAP1Q14558 356 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 GNMTQ14749 295 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 PDK2Q15119 407 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 ELOCQ15369 112 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 SF3A2Q15428 464 aaKnown RBP2.22□□□□□ -2.05
MALAT1-216ENST00000620465 DGUOKQ16854 277 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 RFX4Q33E94 735 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 KRTAP13-3Q3SY46 172 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 PTPN20Q4JDL3 420 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 HSP90AA4PQ58FG1 418 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 SPECC1LQ69YQ0 1117 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 FRMPD2BQ6IN97 320 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 C1orf94Q6P1W5 598 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 C22orf39Q6P5X5 142 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 RGS9BPQ6ZS82 235 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 DHDDSQ86SQ9 333 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 TAC4Q86UU9 113 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 TRIM69Q86WT6 500 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 HORMAD1Q86X24 394 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 GKN2Q86XP6 184 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 PHF13Q86YI8 300 aaPredicted RBP2.22□□□□□ -2.05
MALAT1-216ENST00000620465 MMAAQ8IVH4 418 aaKnown RBP2.22□□□□□ -2.05
MALAT1-216ENST00000620465 TBC1D21Q8IYX1 336 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 ZNF786Q8N393 782 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 ATPAF2Q8N5M1 289 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 CCDC112Q8NEF3 446 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 CCDC54Q8NEL0 328 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 OR4F15Q8NGB8 312 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 OR8K1Q8NGG5 319 aa2.22□□□□□ -2.05
MALAT1-216ENST00000620465 OR1N2Q8NGR9 330 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms