RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 PLA2G12AQ9BZM1 189 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 LINC00470Q9BZP3 86 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 NELFAQ9H3P2 528 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 HEATR1Q9H583 2144 aaKnown RBP4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ABCB9Q9NP78 766 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ERVK13-1Q9NX77 482 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 AASSQ9UDR5 926 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 IL20RAQ9UHF4 553 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ING4Q9UNL4 249 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 SIGLEC7Q9Y286 467 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 AMDHD2Q9Y303 409 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 ADAM18Q9Y3Q7 739 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 N6AMT1Q9Y5N5 214 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 CDH10Q9Y6N8 788 aa4.59□□□□□ -1.67
SHMT1-211ENST00000618902 MXRA5Q9NR99 2828 aa4.59□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF503-AS2A6NEH8 195 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 NAP1L6A6NFF2 107 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 DEFB108AA8MXU0 73 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 H7C1C5 153 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 J3QRE1 110 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 PDCD5O14737 125 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 CTDSPLO15194 276 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 RNF13O43567 381 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 SULT1B1O43704 296 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 GPRIN2O60269 458 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ARL6IP5O75915 188 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 RGS9O75916 674 aaPredicted RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 IGHMP01871 453 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 C1QBP02746 253 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 MT-ND5P03915 603 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 CD14P08571 375 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 CSF3P09919 207 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 PGA4P0DJD7 388 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 PGA3P0DJD8 388 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 SAGP10523 405 aaPredicted RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 NPR2P20594 1047 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 MAP2K3P46734 347 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 CENPAP49450 140 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ETV1P50549 477 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 BIDP55957 195 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 KRTAP10-9P60411 292 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 CTXN1P60606 82 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 LCN6P62502 163 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 MRPS10P82664 201 aaKnown RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 FMODQ06828 376 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 FAPQ12884 760 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 HNRNPA0Q13151 305 aaKnown RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 MAB21L1Q13394 359 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 CAMK2DQ13557 499 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 DYRK1AQ13627 763 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF79Q15937 498 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 GABRA6Q16445 453 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 DEFB113Q30KQ7 82 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ALG10Q5BKT4 473 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 MESTQ5EB52 335 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 SLC35D3Q5M8T2 416 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 OTPQ5XKR4 325 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 THOC7Q6I9Y2 204 aaKnown RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF322Q6U7Q0 402 aaPredicted RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF782Q6ZMW2 699 aaPredicted RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF620Q6ZNG0 422 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF627Q7L945 461 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 CXXC5Q7LFL8 322 aaKnown RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 BHLHA15Q7RTS1 189 aaPredicted RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 FAM122BQ7Z309 247 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 SYS1Q8N2H4 156 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 Q8N402 240 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ARIH2OSQ8N7S6 290 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 OR6X1Q8NH79 312 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 FGFBP3Q8TAT2 258 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 GATAD2BQ8WXI9 593 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ASB13Q8WXK3 278 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 SLC7A6Q92536 515 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 BCL2L2Q92843 193 aaPredicted RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 S100PBPQ96BU1 408 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 TRMT61AQ96FX7 289 aaKnown RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 MED30Q96HR3 178 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ST6GAL2Q96JF0 529 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 SAMD8Q96LT4 415 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 Q96M85 177 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ALKBH3Q96Q83 286 aaPredicted RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 KCNK17Q96T54 332 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 DDOQ99489 341 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 MNTQ99583 582 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 WACQ9BTA9 647 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 BARHL1Q9BZE3 327 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 GSX2Q9BZM3 304 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 SLCO5A1Q9H2Y9 848 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 EGLN3Q9H6Z9 239 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 BARX1Q9HBU1 254 aaPredicted RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 NOX3Q9HBY0 568 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 GPR35Q9HC97 309 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 B3GAT2Q9NPZ5 323 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 CYSLTR2Q9NS75 346 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 DDX28Q9NUL7 540 aaKnown RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 DNAJC27Q9NZQ0 273 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 UPB1Q9UBR1 384 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 CLEC2DQ9UHP7 191 aa4.58□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF346Q9UL40 294 aaKnown RBP4.58□□□□□ -1.68
SHMT1-211ENST00000618902 TBC1D24Q9ULP9 559 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms