RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CYYR1Q96J86 154 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 SRXN1Q9BYN0 137 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 CNTD2Q9H8S5 307 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 FARSAQ9Y285 508 aaKnown RBP10.99□□□□□ -0.65
CIITA-212ENST00000618207 PCDHGA5Q9Y5G8 931 aa10.99□□□□□ -0.65
CIITA-212ENST00000618207 LOC100509620A0A075B734 347 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 TMEM235A6NFC5 223 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 SMAD9O15198 467 aaKnown RBP10.98□□□□□ -0.65
CIITA-212ENST00000618207 ECDO95905 644 aaPredicted RBP10.98□□□□□ -0.65
CIITA-212ENST00000618207 CD3DP04234 171 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 ACHEP22303 614 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 CSNK1A1P48729 337 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 MMP16P51512 607 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 RTN4RL2Q86UN3 420 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 BEST3Q8N1M1 668 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 CHST4Q8NCG5 386 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 OR4C16Q8NGL9 310 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 RBM14Q96PK6 669 aaKnown RBP10.98□□□□□ -0.65
CIITA-212ENST00000618207 MRI1Q9BV20 369 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 ZNF275Q9NSD4 429 aaPredicted RBP10.98□□□□□ -0.65
CIITA-212ENST00000618207 MAP1BP46821 2468 aaKnown RBP10.98□□□□□ -0.65
CIITA-212ENST00000618207 C7orf66A4D0T2 115 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 OR5H15A6NDH6 313 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 ZNF878C9JN71 531 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 C1QBP02746 253 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 HRGP04196 525 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 ADH6P28332 368 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 PRSS3P35030 304 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 SLC25A47Q6Q0C1 308 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 OR5D18Q8NGL1 313 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 GPR84Q9NQS5 396 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 GLTPQ9NZD2 209 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 COPZ2Q9P299 210 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 ZNF69Q9UC07 566 aa10.98□□□□□ -0.65
CIITA-212ENST00000618207 SVILO95425 2214 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 A0A1B0GVI7 797 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 A0A1W2PNU3 283 aaPredicted RBP10.97□□□□□ -0.65
CIITA-212ENST00000618207 NPIPB13A6NJU9 1138 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 C9orf172C9J069 976 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 NPIPB4C9JG80 1138 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 E9PLN8 166 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 M0QYG6 137 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 SULT1B1O43704 296 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 TLX3O43711 291 aaPredicted RBP10.97□□□□□ -0.65
CIITA-212ENST00000618207 UBCP0CG48 685 aaKnown RBP10.97□□□□□ -0.65
CIITA-212ENST00000618207 IGFBP3P17936 291 aaPredicted RBP10.97□□□□□ -0.65
CIITA-212ENST00000618207 ERP29P30040 261 aaKnown RBP10.97□□□□□ -0.65
CIITA-212ENST00000618207 DLX5P56178 289 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 ACER2Q5QJU3 275 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 CREB3L2Q70SY1 520 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 FGD2Q7Z6J4 655 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 OR8B12Q8NGG6 310 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 SLC25A28Q96A46 364 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 THOC3Q96J01 351 aaKnown RBP10.97□□□□□ -0.65
CIITA-212ENST00000618207 DEPPQ9NTK1 212 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 CIB4A0PJX0 185 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 CBR3O75828 277 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 IGHV3-9P01782 118 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 DBHP09172 617 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 PATE4P0C8F1 98 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 ICAM2P13598 275 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 CX3CR1P49238 355 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 SRYQ05066 204 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 CHMP1BQ7LBR1 199 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 ZBTB44Q8NCP5 570 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 OR11H4Q8NGC9 324 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 OR51S1Q8NGJ8 323 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 DEDD2Q8WXF8 326 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 C7orf50Q9BRJ6 194 aaKnown RBP10.97□□□□□ -0.65
CIITA-212ENST00000618207 GINS4Q9BRT9 223 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 HES7Q9BYE0 225 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 STRADBQ9C0K7 418 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 FBXO4Q9UKT5 387 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 MGAT4AQ9UM21 535 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 SPTBN2O15020 2390 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 CFAP47Q6ZTR5 3102 aa10.97□□□□□ -0.65
CIITA-212ENST00000618207 DMXL1Q9Y485 3027 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 PYCARD-AS1I3L0S3 204 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 ZNHIT1O43257 154 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 CXCL13O43927 109 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 GP1BAP07359 652 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 ZNF20P17024 532 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 BDKRB2P30411 391 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 PMPCAQ10713 525 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 METTL11BQ5VVY1 283 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 ZNF101Q8IZC7 436 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 WDR89Q96FK6 387 aaPredicted RBP10.96□□□□□ -0.65
CIITA-212ENST00000618207 LIN37Q96GY3 246 aaPredicted RBP10.96□□□□□ -0.65
CIITA-212ENST00000618207 SFXN2Q96NB2 322 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 OR2M2Q96R28 347 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 METTL17Q9H7H0 456 aaPredicted RBP10.96□□□□□ -0.65
CIITA-212ENST00000618207 PLEKHA1Q9HB21 404 aa10.96□□□□□ -0.65
CIITA-212ENST00000618207 PINLYPA6NC86 204 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 B4E171 279 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 H7C417 338 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 ANXA3P12429 323 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 GDF1P27539 372 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 SSTR2P30874 369 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 DLSTP36957 453 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 TSPAN7P41732 249 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms