RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 AMIGO2Q86SJ2 522 aa21.13■□□□□ 0.97
PMS1-220ENST00000618056 NAA40Q86UY6 237 aa21.13■□□□□ 0.97
PMS1-220ENST00000618056 ERI1Q8IV48 349 aaKnown RBP21.13■□□□□ 0.97
PMS1-220ENST00000618056 CPOQ8IVL8 374 aa21.13■□□□□ 0.97
PMS1-220ENST00000618056 MSI2Q96DH6 328 aaKnown RBP21.13■□□□□ 0.97
PMS1-220ENST00000618056 OR51V1Q9H2C8 321 aa21.13■□□□□ 0.97
PMS1-220ENST00000618056 KRT84Q9NSB2 600 aa21.13■□□□□ 0.97
PMS1-220ENST00000618056 ZNF878C9JN71 531 aa21.12■□□□□ 0.97
PMS1-220ENST00000618056 PPIHO43447 177 aaKnown RBP21.12■□□□□ 0.97
PMS1-220ENST00000618056 CRLF1O75462 422 aa21.12■□□□□ 0.97
PMS1-220ENST00000618056 LCATP04180 440 aa21.12■□□□□ 0.97
PMS1-220ENST00000618056 ZNF16P17020 682 aaPredicted RBP21.12■□□□□ 0.97
PMS1-220ENST00000618056 PTGES3Q15185 160 aaKnown RBP21.12■□□□□ 0.97
PMS1-220ENST00000618056 HFEQ30201 348 aa21.12■□□□□ 0.97
PMS1-220ENST00000618056 DRAM2Q6UX65 266 aa21.12■□□□□ 0.97
PMS1-220ENST00000618056 RHOUQ7L0Q8 258 aa21.12■□□□□ 0.97
PMS1-220ENST00000618056 DPY19L4Q7Z388 723 aa21.12■□□□□ 0.97
PMS1-220ENST00000618056 TIGD4Q8IY51 512 aa21.12■□□□□ 0.97
PMS1-220ENST00000618056 CENPNQ96H22 339 aaPredicted RBP21.12■□□□□ 0.97
PMS1-220ENST00000618056 COPS4Q9BT78 406 aa21.12■□□□□ 0.97
PMS1-220ENST00000618056 DCLRE1BQ9H816 532 aa21.12■□□□□ 0.97
PMS1-220ENST00000618056 TMEM160Q9NX00 188 aa21.12■□□□□ 0.97
PMS1-220ENST00000618056 IQCF6A8MYZ5 107 aa21.11■□□□□ 0.97
PMS1-220ENST00000618056 TNFSF4P23510 183 aa21.11■□□□□ 0.97
PMS1-220ENST00000618056 IL2RGP31785 369 aa21.11■□□□□ 0.97
PMS1-220ENST00000618056 TNFAIP6P98066 277 aaPredicted RBP21.11■□□□□ 0.97
PMS1-220ENST00000618056 GK2Q14410 553 aaPredicted RBP21.11■□□□□ 0.97
PMS1-220ENST00000618056 SLC35D3Q5M8T2 416 aa21.11■□□□□ 0.97
PMS1-220ENST00000618056 OR2T2Q6IF00 324 aa21.11■□□□□ 0.97
PMS1-220ENST00000618056 SHFQ7M4L6 423 aa21.11■□□□□ 0.97
PMS1-220ENST00000618056 OR8G5Q8NG78 346 aa21.11■□□□□ 0.97
PMS1-220ENST00000618056 OR6N2Q8NGY6 317 aa21.11■□□□□ 0.97
PMS1-220ENST00000618056 C1orf159Q96HA4 380 aa21.11■□□□□ 0.97
PMS1-220ENST00000618056 KCNJ15Q99712 375 aa21.11■□□□□ 0.97
PMS1-220ENST00000618056 SOX7Q9BT81 388 aa21.11■□□□□ 0.97
PMS1-220ENST00000618056 WNK2Q9Y3S1 2297 aa21.1■□□□□ 0.97
PMS1-220ENST00000618056 SELEP16581 610 aa21.1■□□□□ 0.97
PMS1-220ENST00000618056 SLC2A5P22732 501 aa21.1■□□□□ 0.97
PMS1-220ENST00000618056 SLC6A9P48067 706 aa21.1■□□□□ 0.97
PMS1-220ENST00000618056 MALLQ13021 153 aa21.1■□□□□ 0.97
PMS1-220ENST00000618056 EIF2B1Q14232 305 aaKnown RBP21.1■□□□□ 0.97
PMS1-220ENST00000618056 SNAPC1Q16533 368 aa21.1■□□□□ 0.97
PMS1-220ENST00000618056 OR2Z1Q8NG97 314 aa21.1■□□□□ 0.97
PMS1-220ENST00000618056 ZMYND19Q96E35 227 aaPredicted RBP21.1■□□□□ 0.97
PMS1-220ENST00000618056 ZNF582Q96NG8 517 aaPredicted RBP21.1■□□□□ 0.97
PMS1-220ENST00000618056 CENPMQ9NSP4 180 aa21.1■□□□□ 0.97
PMS1-220ENST00000618056 TVP23BQ9NYZ1 205 aa21.1■□□□□ 0.97
PMS1-220ENST00000618056 IL19Q9UHD0 177 aa21.1■□□□□ 0.97
PMS1-220ENST00000618056 ENOPH1Q9UHY7 261 aa21.1■□□□□ 0.97
PMS1-220ENST00000618056 CACNG2Q9Y698 323 aa21.1■□□□□ 0.97
PMS1-220ENST00000618056 CLDN25C9JDP6 229 aa21.09■□□□□ 0.97
PMS1-220ENST00000618056 SLC15A1P46059 708 aa21.09■□□□□ 0.97
PMS1-220ENST00000618056 GRB2P62993 217 aaKnown RBP21.09■□□□□ 0.97
PMS1-220ENST00000618056 TAF13Q15543 124 aa21.09■□□□□ 0.97
PMS1-220ENST00000618056 KLHL12Q53G59 568 aa21.09■□□□□ 0.97
PMS1-220ENST00000618056 FAM166AQ6J272 317 aa21.09■□□□□ 0.97
PMS1-220ENST00000618056 CXXC5Q7LFL8 322 aaKnown RBP21.09■□□□□ 0.97
PMS1-220ENST00000618056 OR5AS1Q8N127 324 aa21.09■□□□□ 0.97
PMS1-220ENST00000618056 OR13G1Q8NGZ3 307 aa21.09■□□□□ 0.97
PMS1-220ENST00000618056 CLDND2Q8NHS1 167 aa21.09■□□□□ 0.97
PMS1-220ENST00000618056 RNF133Q8WVZ7 376 aa21.09■□□□□ 0.97
PMS1-220ENST00000618056 ABHD6Q9BV23 337 aa21.09■□□□□ 0.97
PMS1-220ENST00000618056 PRRG3Q9BZD7 231 aa21.09■□□□□ 0.97
PMS1-220ENST00000618056 LOC100289279A0A1B0GTE1 492 aa21.08■□□□□ 0.97
PMS1-220ENST00000618056 A0A1B0GWJ7 208 aa21.08■□□□□ 0.97
PMS1-220ENST00000618056 MITFO75030 526 aaPredicted RBP21.08■□□□□ 0.97
PMS1-220ENST00000618056 TNFRSF1AP19438 455 aa21.08■□□□□ 0.97
PMS1-220ENST00000618056 SLC3A1Q07837 685 aa21.08■□□□□ 0.97
PMS1-220ENST00000618056 RCN1Q15293 331 aa21.08■□□□□ 0.97
PMS1-220ENST00000618056 SPRNQ5BIV9 151 aa21.08■□□□□ 0.97
PMS1-220ENST00000618056 BBS1Q8NFJ9 593 aa21.08■□□□□ 0.97
PMS1-220ENST00000618056 PYDC1Q8WXC3 89 aa21.08■□□□□ 0.97
PMS1-220ENST00000618056 SLC30A2Q9BRI3 323 aa21.08■□□□□ 0.97
PMS1-220ENST00000618056 SEMA6AQ9H2E6 1030 aa21.08■□□□□ 0.97
PMS1-220ENST00000618056 TOR3AQ9H497 397 aa21.08■□□□□ 0.97
PMS1-220ENST00000618056 OAZ3Q9UMX2 235 aa21.08■□□□□ 0.97
PMS1-220ENST00000618056 MXRA5Q9NR99 2828 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 WNT9BO14905 357 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 PRKXP51817 358 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 SNAI3Q3KNW1 292 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 PGAP1Q75T13 922 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 ZNF454Q8N9F8 522 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 OTOSQ8NHW6 89 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 CCL17Q92583 94 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 OSBPL10Q9BXB5 764 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 TMEFF2Q9UIK5 374 aaPredicted RBP21.07■□□□□ 0.96
PMS1-220ENST00000618056 ZAR1LA6NP61 321 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 LMX1BO60663 402 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 EPHA2P29317 976 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 CDH15P55291 814 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 SLX4IPQ5VYV7 408 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 ZFP1Q6P2D0 407 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 LINC01356Q8N9X3 169 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 RAB1CQ92928 201 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 TIMD4Q96H15 378 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 NKX1-2Q9UD57 310 aaPredicted RBP21.07■□□□□ 0.96
PMS1-220ENST00000618056 KCNS2Q9ULS6 477 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 WIPI2Q9Y4P8 454 aa21.07■□□□□ 0.96
PMS1-220ENST00000618056 SELENOFO60613 162 aa21.06■□□□□ 0.96
PMS1-220ENST00000618056 TGFAP01135 160 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms