RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 ANXA2P07355 339 aaKnown RBP15.46■□□□□ 0.07
CNOT3-209ENST00000617930 ITGA3P26006 1051 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 RTP5Q14D33 572 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 POU4F3Q15319 338 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 KCNMB1Q16558 191 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 OR8H3Q8N146 312 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 OR51D1Q8NGF3 324 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 FCAMRQ8WWV6 532 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 TMEM54Q969K7 222 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 S100A16Q96FQ6 103 aaKnown RBP15.46■□□□□ 0.07
CNOT3-209ENST00000617930 ADGRG7Q96K78 797 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 FAM117AQ9C073 453 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 DLL4Q9NR61 685 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 PLA2G3Q9NZ20 509 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 LRFN1Q9P244 771 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 SCP2D1Q9UJQ7 156 aa15.46■□□□□ 0.07
CNOT3-209ENST00000617930 ARGFXA6NJG6 315 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 EIF1BO60739 113 aaKnown RBP15.45■□□□□ 0.06
CNOT3-209ENST00000617930 PRAF2O60831 178 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 TMEM127O75204 238 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 SLC22A5O76082 557 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 WDPCPO95876 746 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 ACSM4P0C7M7 580 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 CD37P11049 281 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 CDK2P24941 298 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 CFPP27918 469 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 RFC3P40938 356 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 RSPO4Q2I0M5 234 aaPredicted RBP15.45■□□□□ 0.06
CNOT3-209ENST00000617930 TMEM69Q5SWH9 247 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 SLC25A28Q96A46 364 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 HAVCR1Q96D42 359 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 MRI1Q9BV20 369 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 CLEC4MQ9H2X3 399 aaPredicted RBP15.45■□□□□ 0.06
CNOT3-209ENST00000617930 EIF3KQ9UBQ5 218 aaKnown RBP15.45■□□□□ 0.06
CNOT3-209ENST00000617930 STEAP1Q9UHE8 339 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 KLK13Q9UKR3 277 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 RHBDD3Q9Y3P4 386 aa15.45■□□□□ 0.06
CNOT3-209ENST00000617930 PHF3Q92576 2039 aaKnown RBP15.45■□□□□ 0.06
CNOT3-209ENST00000617930 SPENQ96T58 3664 aaKnown RBP15.45■□□□□ 0.06
CNOT3-209ENST00000617930 C5orf63A6NC05 138 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 E9PLN8 166 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 GMDSO60547 372 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 GFRA3O60609 400 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 CNR1P21554 472 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 ZNF81P51508 661 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 CLN3Q13286 438 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 ESCO2Q56NI9 601 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 LYPD6Q86Y78 171 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.44■□□□□ 0.06
CNOT3-209ENST00000617930 ZNF680Q8NEM1 530 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 ZNF416Q9BWM5 594 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 ZNF436Q9C0F3 470 aaPredicted RBP15.44■□□□□ 0.06
CNOT3-209ENST00000617930 OR10A4Q9H209 315 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 FOXD3Q9UJU5 478 aaPredicted RBP15.44■□□□□ 0.06
CNOT3-209ENST00000617930 HHLA2Q9UM44 414 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 FLVCR2Q9UPI3 526 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 LEUTXA8MZ59 168 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 SULT1B1O43704 296 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 TRAPPC6AO75865 159 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 CELA3AP09093 270 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 PSMB1P20618 241 aaKnown RBP15.44■□□□□ 0.06
CNOT3-209ENST00000617930 VEGFCP49767 419 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 ZNF133P52736 654 aaPredicted RBP15.44■□□□□ 0.06
CNOT3-209ENST00000617930 GFRA1P56159 465 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 AIMP2Q13155 320 aaKnown RBP15.44■□□□□ 0.06
CNOT3-209ENST00000617930 LINC00696Q6ZRV3 163 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 ELMOD2Q8IZ81 293 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 RAB40AQ8WXH6 277 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 NABP1Q96AH0 204 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 PBOV1Q9GZY1 135 aa15.44■□□□□ 0.06
CNOT3-209ENST00000617930 CDV3Q9UKY7 258 aaKnown RBP15.44■□□□□ 0.06
CNOT3-209ENST00000617930 A0A1B0GTI1 187 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 ARPC1BO15143 372 aaKnown RBP15.43■□□□□ 0.06
CNOT3-209ENST00000617930 HPXP02790 462 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 SLC2A1P11166 492 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 ACHEP22303 614 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 ARPC4P59998 168 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 RAC3P60763 192 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 CSNK2A1P68400 391 aaPredicted RBP15.43■□□□□ 0.06
CNOT3-209ENST00000617930 MRPS10P82664 201 aaKnown RBP15.43■□□□□ 0.06
CNOT3-209ENST00000617930 TMEM255AQ5JRV8 349 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 ELFN2Q5R3F8 820 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 METTL11BQ5VVY1 283 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 JMJD6Q6NYC1 403 aaPredicted RBP15.43■□□□□ 0.06
CNOT3-209ENST00000617930 CCDC28AQ8IWP9 274 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 OR13C3Q8NGS6 347 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 ROBO4Q8WZ75 1007 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 DPCDQ9BVM2 203 aaPredicted RBP15.43■□□□□ 0.06
CNOT3-209ENST00000617930 CGGBP1Q9UFW8 167 aaPredicted RBP15.43■□□□□ 0.06
CNOT3-209ENST00000617930 ZNF716A6NP11 495 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 DLL1O00548 723 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 EFSO43281 561 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 CXCL13O43927 109 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 VAMP5O95183 116 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 CRYZL1O95825 349 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 TGM6O95932 706 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 FSTP19883 344 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 DCTDP32321 178 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 CSNK1A1P48729 337 aa15.43■□□□□ 0.06
CNOT3-209ENST00000617930 PRKXP51817 358 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms