RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 GPER1Q99527 375 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 A4GALTQ9NPC4 353 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 FUT9Q9Y231 359 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 LIPGQ9Y5X9 500 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 FLVCR1Q9Y5Y0 555 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 COL2A1P02458 1487 aaPredicted RBP6.69□□□□□ -1.34
PDE6A-205ENST00000617647 RBFOX3A6NFN3 312 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 TMEM238C9JI98 176 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 ALOX12BO75342 701 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 NTN1O95631 604 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 AMBPP02760 352 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 LCATP04180 440 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 ASGR1P07306 291 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 CXCR1P25024 350 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 GABRA4P48169 554 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 MMP16P51512 607 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 RPS24P62847 133 aaKnown RBP6.69□□□□□ -1.34
PDE6A-205ENST00000617647 ZNF92Q03936 586 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 LY6G6FQ5SQ64 297 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 KCNIP4Q6PIL6 250 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 VITQ6UXI7 678 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 ZSCAN4Q8NAM6 433 aaPredicted RBP6.69□□□□□ -1.34
PDE6A-205ENST00000617647 PLPP7Q8NBV4 271 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 OR4D11Q8NGI4 311 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 OR4K15Q8NH41 348 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 REEP6Q96HR9 211 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 OR5B2Q96R09 309 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 BRF2Q9HAW0 419 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 MSL2Q9HCI7 577 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 SRA1Q9HD15 236 aaKnown RBP6.69□□□□□ -1.34
PDE6A-205ENST00000617647 CHTOPQ9Y3Y2 248 aaKnown RBP6.69□□□□□ -1.34
PDE6A-205ENST00000617647 ZFP37Q9Y6Q3 630 aaPredicted RBP6.69□□□□□ -1.34
PDE6A-205ENST00000617647 TANC1Q9C0D5 1861 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 LOC100289279A0A1B0GTE1 492 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 SLC33A1O00400 549 aaPredicted RBP6.69□□□□□ -1.34
PDE6A-205ENST00000617647 ZNF749O43361 778 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 ETHE1O95571 254 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 STATHP02808 62 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 CDKN1BP46527 198 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 RGRP47804 291 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 GABRA2P47869 451 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 MRPS11P82912 194 aaKnown RBP6.69□□□□□ -1.34
PDE6A-205ENST00000617647 MRPS34P82930 218 aaKnown RBP6.69□□□□□ -1.34
PDE6A-205ENST00000617647 C2orf76Q3KRA6 126 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 DMKNQ6E0U4 476 aaPredicted RBP6.69□□□□□ -1.34
PDE6A-205ENST00000617647 NPAS4Q8IUM7 802 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 TMEM229BQ8NBD8 167 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 OR56B2PQ8NGI1 322 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 OR51F2Q8NH61 342 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 PELI1Q96FA3 418 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 C16orf58Q96GQ5 468 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 C2orf50Q96LR7 162 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 CCDC3Q9BQI4 270 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 SIDT1Q9NXL6 827 aaKnown RBP6.69□□□□□ -1.34
PDE6A-205ENST00000617647 OR5AC2Q9NZP5 309 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 TMED7Q9Y3B3 224 aa6.69□□□□□ -1.34
PDE6A-205ENST00000617647 COL11A2P13942 1736 aaPredicted RBP6.68□□□□□ -1.34
PDE6A-205ENST00000617647 TMEM269A0A1B0GVZ9 245 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 WNT11O96014 354 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 IFNA1P01562 189 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 CD5P06127 495 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 SERPINA4P29622 427 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 EIPR1Q53HC9 387 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 LRRC73Q5JTD7 316 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 TMEM268Q5VZI3 342 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 PAQR9Q6ZVX9 377 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 OR52N4Q8NGI2 321 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 ZNF587Q96SQ5 575 aaPredicted RBP6.68□□□□□ -1.34
PDE6A-205ENST00000617647 GINS3Q9BRX5 216 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 ZNF701Q9NV72 531 aaPredicted RBP6.68□□□□□ -1.34
PDE6A-205ENST00000617647 IER3IP1Q9Y5U9 82 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 ZNF780BQ9Y6R6 833 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 CCDC163A0A0D9SF12 145 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 MSGN1A6NI15 193 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 ZNF814B7Z6K7 855 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 SMAD6O43541 496 aaKnown RBP6.68□□□□□ -1.34
PDE6A-205ENST00000617647 TTRP02766 147 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 LGALS2P05162 132 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 GSTP1P09211 210 aaKnown RBP6.68□□□□□ -1.34
PDE6A-205ENST00000617647 MMP9P14780 707 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 FOLR1P15328 257 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 TMEM33P57088 247 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 PCBP3P57721 371 aaKnown RBP6.68□□□□□ -1.34
PDE6A-205ENST00000617647 OR4A47Q6IF82 309 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 SLC39A5Q6ZMH5 540 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 ERASQ7Z444 233 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 TMEM239Q8WW34 195 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 RSPRY1Q96DX4 576 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 NEURL3Q96EH8 262 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 SMIM8Q96KF7 97 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 KCNK15Q9H427 330 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 ZNF586Q9NXT0 402 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 IL17CQ9P0M4 197 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 SMCHD1A6NHR9 2005 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 ZNF264O43296 627 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 HYAL3O43820 417 aaPredicted RBP6.68□□□□□ -1.34
PDE6A-205ENST00000617647 CTAG2O75638 210 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 OPN1MWP04001 364 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 OPN1MW2P0DN77 364 aa6.68□□□□□ -1.34
PDE6A-205ENST00000617647 OPN1MW3P0DN78 364 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms