RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 OR1F12Q8NHA8 337 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 FAM168AQ92567 244 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 MYDGFQ969H8 173 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 ATF6BQ99941 703 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 COPS4Q9BT78 406 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 TTTY10Q9BZA0 68 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 CDH20Q9HBT6 801 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 NOX3Q9HBY0 568 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 CNOT2Q9NZN8 540 aaKnown RBP12.81□□□□□ -0.36
UBXN1-218ENST00000616865 IKZF2Q9UKS7 526 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 EXOGQ9Y2C4 368 aaKnown RBP12.81□□□□□ -0.36
UBXN1-218ENST00000616865 CCDC159P0C7I6 412 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 CCNOP22674 350 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 STOMP27105 288 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 APEX1P27695 318 aaKnown RBP12.8□□□□□ -0.36
UBXN1-218ENST00000616865 HSD11B1P28845 292 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 SLC15A1P46059 708 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 FABP6P51161 128 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 C3orf36Q3SXR2 165 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 CCDC92Q53HC0 331 aaPredicted RBP12.8□□□□□ -0.36
UBXN1-218ENST00000616865 LAIR2Q6ISS4 152 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 ZNF544Q6NX49 715 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 VASH1Q7L8A9 365 aaPredicted RBP12.8□□□□□ -0.36
UBXN1-218ENST00000616865 SLC30A7Q8NEW0 376 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 IL17RDQ8NFM7 739 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 C10orf105Q8TEF2 133 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 SNX33Q8WV41 574 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 IPCEF1Q8WWN9 437 aaPredicted RBP12.8□□□□□ -0.36
UBXN1-218ENST00000616865 GGHQ92820 318 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 SPTSSAQ969W0 71 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 TMEM80Q96HE8 168 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 MS4A3Q96HJ5 214 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 MAP6Q96JE9 813 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 COQ7Q99807 217 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 FGF20Q9NP95 211 aaPredicted RBP12.8□□□□□ -0.36
UBXN1-218ENST00000616865 INPP5EQ9NRR6 644 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 MRPS18AQ9NVS2 196 aaKnown RBP12.8□□□□□ -0.36
UBXN1-218ENST00000616865 PSORS1C1Q9UIG5 152 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 LRCH1Q9Y2L9 728 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 EXOSC1Q9Y3B2 195 aaKnown RBP12.8□□□□□ -0.36
UBXN1-218ENST00000616865 PLCE1Q9P212 2302 aa12.8□□□□□ -0.36
UBXN1-218ENST00000616865 IGHV1-18A0A0C4DH31 117 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 A0A1W2PQL4 384 aaPredicted RBP12.79□□□□□ -0.36
UBXN1-218ENST00000616865 C5orf49A4QMS7 147 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 OR6C6A6NF89 314 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 IGKV3-15P01624 115 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 CRYAAP02489 173 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 KRT8P05787 483 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 CELA3BP08861 270 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 CSF3P09919 207 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 CECR9P0C854 216 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 IGHV4-31P0DP07 118 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 COX5BP10606 129 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 PSKH1P11801 424 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 PIPP12273 146 aaPredicted RBP12.79□□□□□ -0.36
UBXN1-218ENST00000616865 ZNF14P17017 642 aaPredicted RBP12.79□□□□□ -0.36
UBXN1-218ENST00000616865 ALOX5APP20292 161 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 DCKP27707 260 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 GRB2P62993 217 aaKnown RBP12.79□□□□□ -0.36
UBXN1-218ENST00000616865 HIST1H3AP68431 136 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 GALK2Q01415 458 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 ST3GAL4Q11206 333 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 HIST2H3PS2Q5TEC6 136 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 CYB5R2Q6BCY4 276 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 ARL9Q6T311 187 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 ZNF322Q6U7Q0 402 aaPredicted RBP12.79□□□□□ -0.36
UBXN1-218ENST00000616865 HIST2H3AQ71DI3 136 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 FAM220AQ7Z4H9 259 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 ST7LQ8TDW4 575 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 MROQ9BYG7 248 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 YTHDF1Q9BYJ9 559 aaKnown RBP12.79□□□□□ -0.36
UBXN1-218ENST00000616865 CCDC90BQ9GZT6 254 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 SHARPINQ9H0F6 387 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 UBAP1Q9NZ09 502 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 CRNNQ9UBG3 495 aaPredicted RBP12.79□□□□□ -0.36
UBXN1-218ENST00000616865 EIF3KQ9UBQ5 218 aaKnown RBP12.79□□□□□ -0.36
UBXN1-218ENST00000616865 ATPIF1Q9UII2 106 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 COPS3Q9UNS2 423 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 MYRFQ9Y2G1 1151 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 KLHDC2Q9Y2U9 406 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 PCDHGB5Q9Y5G0 923 aa12.79□□□□□ -0.36
UBXN1-218ENST00000616865 SYNGR3O43761 229 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 IGLV1-44P01699 117 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 THBS2P35442 1172 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 RIDAP52758 137 aaKnown RBP12.78□□□□□ -0.36
UBXN1-218ENST00000616865 TPTEP56180 551 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 ACTA2P62736 377 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 ACTG2P63267 376 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 EGR3Q06889 387 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 LRRN1Q6UXK5 716 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 PLEKHG7Q6ZR37 379 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 LHFPL3Q86UP9 236 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 ZNF283Q8N7M2 679 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 YIPF7Q8N8F6 280 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 CPEB3Q8NE35 698 aaKnown RBP12.78□□□□□ -0.36
UBXN1-218ENST00000616865 RNF133Q8WVZ7 376 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 AMELYQ99218 206 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 DIMT1Q9UNQ2 313 aaKnown RBP12.78□□□□□ -0.36
UBXN1-218ENST00000616865 GRIP1Q9Y3R0 1128 aa12.78□□□□□ -0.36
UBXN1-218ENST00000616865 SPEF1Q9Y4P9 236 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms