RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 PPIAL4CA0A0B4J2A2 164 aa16■□□□□ 0.15
CDX1-202ENST00000616154 PPIAL4DF5H284 164 aa16■□□□□ 0.15
CDX1-202ENST00000616154 SPRY1O43609 319 aaPredicted RBP16■□□□□ 0.15
CDX1-202ENST00000616154 DOK2O60496 412 aa16■□□□□ 0.15
CDX1-202ENST00000616154 PPIAL4FP0DN26 164 aa16■□□□□ 0.15
CDX1-202ENST00000616154 GSTM3P21266 225 aa16■□□□□ 0.15
CDX1-202ENST00000616154 SPRNQ5BIV9 151 aa16■□□□□ 0.15
CDX1-202ENST00000616154 ARL9Q6T311 187 aa16■□□□□ 0.15
CDX1-202ENST00000616154 RASSF6Q6ZTQ3 369 aa16■□□□□ 0.15
CDX1-202ENST00000616154 NPEPL1Q8NDH3 523 aa16■□□□□ 0.15
CDX1-202ENST00000616154 SLC26A10Q8NG04 563 aa16■□□□□ 0.15
CDX1-202ENST00000616154 TSSK2Q96PF2 358 aa16■□□□□ 0.15
CDX1-202ENST00000616154 NMNAT3Q96T66 252 aa16■□□□□ 0.15
CDX1-202ENST00000616154 DDOQ99489 341 aa16■□□□□ 0.15
CDX1-202ENST00000616154 MSL2Q9HCI7 577 aa16■□□□□ 0.15
CDX1-202ENST00000616154 ESM1Q9NQ30 184 aa16■□□□□ 0.15
CDX1-202ENST00000616154 UBAP1Q9NZ09 502 aa16■□□□□ 0.15
CDX1-202ENST00000616154 ASH2LQ9UBL3 628 aa16■□□□□ 0.15
CDX1-202ENST00000616154 B9D1Q9UPM9 204 aa16■□□□□ 0.15
CDX1-202ENST00000616154 NPTNQ9Y639 398 aa16■□□□□ 0.15
CDX1-202ENST00000616154 E9PQ18 207 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 H0YJX3 145 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 DLGAP1O14490 977 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 BHLHE40O14503 412 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 IGHV2-70P01814 119 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 HTR5AP47898 357 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 LCN2P80188 198 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 TNFAIP6P98066 277 aaPredicted RBP15.99■□□□□ 0.15
CDX1-202ENST00000616154 CDK5R2Q13319 367 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 CCDC92Q53HC0 331 aaPredicted RBP15.99■□□□□ 0.15
CDX1-202ENST00000616154 LEG1Q6P5S2 330 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 JAZF1Q86VZ6 243 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 ZDHHC22Q8N966 263 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 ATG16L2Q8NAA4 619 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 SGMS2Q8NHU3 365 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 ST7LQ8TDW4 575 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 RDH12Q96NR8 316 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 IFT27Q9BW83 186 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 PLEK2Q9NYT0 353 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 LHFPL6Q9Y693 200 aa15.99■□□□□ 0.15
CDX1-202ENST00000616154 OR6C68A6NDL8 312 aa15.98■□□□□ 0.15
CDX1-202ENST00000616154 TIMM8AO60220 97 aaPredicted RBP15.98■□□□□ 0.15
CDX1-202ENST00000616154 FOXH1O75593 365 aa15.98■□□□□ 0.15
CDX1-202ENST00000616154 ABHD16AO95870 558 aa15.98■□□□□ 0.15
CDX1-202ENST00000616154 RENP00797 406 aa15.98■□□□□ 0.15
CDX1-202ENST00000616154 PSG7Q13046 419 aa15.98■□□□□ 0.15
CDX1-202ENST00000616154 SNCBQ16143 134 aa15.98■□□□□ 0.15
CDX1-202ENST00000616154 KRTAP27-1Q3LI81 207 aa15.98■□□□□ 0.15
CDX1-202ENST00000616154 ZNF362Q5T0B9 420 aaPredicted RBP15.98■□□□□ 0.15
CDX1-202ENST00000616154 OR4K13Q8NH42 304 aa15.98■□□□□ 0.15
CDX1-202ENST00000616154 DCLRE1CQ96SD1 692 aaKnown RBP15.98■□□□□ 0.15
CDX1-202ENST00000616154 EGLN3Q9H6Z9 239 aa15.98■□□□□ 0.15
CDX1-202ENST00000616154 ZNF556Q9HAH1 456 aa15.98■□□□□ 0.15
CDX1-202ENST00000616154 DCAF16Q9NXF7 216 aa15.98■□□□□ 0.15
CDX1-202ENST00000616154 RER1O15258 196 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 EGR1P18146 543 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 FPR2P25090 351 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 ZFP36P26651 326 aaKnown RBP15.97■□□□□ 0.15
CDX1-202ENST00000616154 UBA52P62987 128 aaKnown RBP15.97■□□□□ 0.15
CDX1-202ENST00000616154 LRRC36Q1X8D7 754 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 TUSC1Q2TAM9 212 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 LNX2Q8N448 690 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 GJC3Q8NFK1 279 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 OR52L1Q8NGH7 329 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 OR8D4Q8NGM9 314 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 OR1F12Q8NHA8 337 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 DVL3Q92997 716 aaPredicted RBP15.97■□□□□ 0.15
CDX1-202ENST00000616154 COG8Q96MW5 612 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 COQ7Q99807 217 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 GABARAPL3Q9BY60 117 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 HDHD2Q9H0R4 259 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 PAPOLBQ9NRJ5 636 aaKnown RBP15.97■□□□□ 0.15
CDX1-202ENST00000616154 TMEM106BQ9NUM4 274 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 KIF17Q9P2E2 1029 aa15.97■□□□□ 0.15
CDX1-202ENST00000616154 OSMP13725 252 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 KITLGP21583 273 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 NOS3P29474 1203 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 RGS6P49758 472 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 TMEM155Q4W5P6 130 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 AWAT1Q58HT5 328 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 OTPQ5XKR4 325 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 SPICQ8N5J4 248 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 ZNF283Q8N7M2 679 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 DEFB108BQ8NET1 73 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 SDR9C7Q8NEX9 313 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 VCX3BQ9H321 246 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 POFUT1Q9H488 388 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 RERGLQ9H628 205 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 RPRD1BQ9NQG5 326 aaKnown RBP15.96■□□□□ 0.15
CDX1-202ENST00000616154 KRT84Q9NSB2 600 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 KCNG2Q9UJ96 466 aa15.96■□□□□ 0.15
CDX1-202ENST00000616154 PURGQ9UJV8 347 aaKnown RBP15.96■□□□□ 0.15
CDX1-202ENST00000616154 POLR3KQ9Y2Y1 108 aaPredicted RBP15.96■□□□□ 0.15
CDX1-202ENST00000616154 MITFO75030 526 aaPredicted RBP15.95■□□□□ 0.14
CDX1-202ENST00000616154 GPANK1O95872 356 aa15.95■□□□□ 0.14
CDX1-202ENST00000616154 SBK2P0C263 348 aa15.95■□□□□ 0.14
CDX1-202ENST00000616154 TNFRSF1AP19438 455 aa15.95■□□□□ 0.14
CDX1-202ENST00000616154 TNFSF4P23510 183 aa15.95■□□□□ 0.14
CDX1-202ENST00000616154 GGT2P36268 569 aa15.95■□□□□ 0.14
CDX1-202ENST00000616154 VHLP40337 213 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms