RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 FN3KQ9H479 309 aa17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 RPRD1BQ9NQG5 326 aaKnown RBP17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 ZNF446Q9NWS9 450 aa17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 V9GYQ6 96 aa17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 KIR2DS1A0A191URI9 304 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 F5H5K5 113 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 ARPC3O15145 178 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 RENP00797 406 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 SLC6A6P31641 620 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 IL13RA1P78552 427 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 LYPD2Q6UXB3 125 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 NLRC3Q7RTR2 1065 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 NAA40Q86UY6 237 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 RNF148Q8N7C7 305 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 C19orf18Q8NEA5 215 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 PITX2Q99697 317 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 ATF6BQ99941 703 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 NUDT16L1Q9BRJ7 211 aaKnown RBP17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 PNRC2Q9NPJ4 139 aaKnown RBP17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 CLN8Q9UBY8 286 aa17.33■□□□□ 0.36
TRAPPC3-208ENST00000616074 SEMG1P04279 462 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 IRF2P14316 349 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 RAD23AP54725 363 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 HOXA4Q00056 320 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 SPIBQ01892 262 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 TRAP1Q12931 704 aaKnown RBP17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 PRAMEF6Q5VXH4 476 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 DCDC5Q6ZRR9 648 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 ZBTB46Q86UZ6 589 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 FITM2Q8N6M3 262 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 CELF2-AS1Q8N7Q2 184 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 Q8TCH9 128 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 SLCO4A1Q96BD0 722 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 IFT27Q9BW83 186 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 CDADC1Q9BWV3 514 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 SPAG4Q9NPE6 437 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 CYB5R1Q9UHQ9 305 aa17.32■□□□□ 0.36
TRAPPC3-208ENST00000616074 OR6C68A6NDL8 312 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 FAM20BO75063 409 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 GADD45GO95257 159 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 LCATP04180 440 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 GGT2P36268 569 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 CD200P41217 278 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 ECH1Q13011 328 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 SLC36A3Q495N2 470 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 CLEC12AQ5QGZ9 265 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 WDR25Q64LD2 544 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 BRD3OSQ6XYD6 125 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 ZNF841Q6ZN19 808 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 SDR9C7Q8NEX9 313 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 OR10S1Q8NGN2 331 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 OR2AJ1Q8NGZ0 328 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 CMTM5Q96DZ9 223 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 UFSP2Q9NUQ7 469 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 ADA2Q9NZK5 511 aa17.31■□□□□ 0.36
TRAPPC3-208ENST00000616074 POM121CA8CG34 1229 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 PHYHO14832 338 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 HOXA3O43365 443 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 OR10H3O60404 316 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 HLA-DQA2P01906 255 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 MDKP21741 143 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 NOS3P29474 1203 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 FGF12P61328 243 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 MALLQ13021 153 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 MPPED2Q15777 294 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 PGAP1Q75T13 922 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 OR11L1Q8NGX0 322 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 ERGIC1Q969X5 290 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 PYURFQ96I23 114 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 MAP6Q96JE9 813 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 MYLK2Q9H1R3 596 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 GORASP2Q9H8Y8 452 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 MRPL22Q9NWU5 206 aaKnown RBP17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 TMCC3Q9ULS5 477 aa17.3■□□□□ 0.36
TRAPPC3-208ENST00000616074 C22orf46C9J442 243 aa17.29■□□□□ 0.36
TRAPPC3-208ENST00000616074 GMNNO75496 209 aa17.29■□□□□ 0.36
TRAPPC3-208ENST00000616074 ANOS1P23352 680 aa17.29■□□□□ 0.36
TRAPPC3-208ENST00000616074 PSMB10P40306 273 aa17.29■□□□□ 0.36
TRAPPC3-208ENST00000616074 SMIM11AP58511 58 aa17.29■□□□□ 0.36
TRAPPC3-208ENST00000616074 DEFB112Q30KQ8 113 aa17.29■□□□□ 0.36
TRAPPC3-208ENST00000616074 C16orf87Q6PH81 154 aa17.29■□□□□ 0.36
TRAPPC3-208ENST00000616074 SPATC1Q76KD6 591 aa17.29■□□□□ 0.36
TRAPPC3-208ENST00000616074 SPRYD4Q8WW59 207 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC3-208ENST00000616074 M0R135 149 aa17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 CA6P23280 308 aa17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 OMGP23515 440 aa17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 GSSP48637 474 aa17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 TPTEP56180 551 aa17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 OR8G1Q15617 311 aa17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 SLC35F1Q5T1Q4 408 aa17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 ZNF620Q6ZNG0 422 aa17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 MRPL21Q7Z2W9 205 aaKnown RBP17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 TMIGD2Q96BF3 282 aa17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 ZNF799Q96GE5 643 aa17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 PRDM13Q9H4Q3 707 aa17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 CTSZQ9UBR2 303 aa17.28■□□□□ 0.36
TRAPPC3-208ENST00000616074 ENSAO43768 121 aaKnown RBP17.27■□□□□ 0.36
TRAPPC3-208ENST00000616074 RRM2P31350 389 aa17.27■□□□□ 0.36
TRAPPC3-208ENST00000616074 RPS27P42677 84 aaKnown RBP17.27■□□□□ 0.36
TRAPPC3-208ENST00000616074 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms