RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 KLF3P57682 345 aaPredicted RBP11.52□□□□□ -0.57
TCF4-248ENST00000616053 TNXAQ16473 311 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 DEFB121Q5J5C9 76 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.52□□□□□ -0.57
TCF4-248ENST00000616053 TMEM218A2RU14 115 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 GNG7O60262 68 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 PRSS1P07477 247 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 SH3BP2P78314 561 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 SRSF9Q13242 221 aaKnown RBP eCLIP11.52□□□□□ -0.57
TCF4-248ENST00000616053 FNDC7Q5VTL7 733 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 OLIG1Q8TAK6 271 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 INSM2Q96T92 566 aaPredicted RBP11.52□□□□□ -0.57
TCF4-248ENST00000616053 TRPM6Q9BX84 2022 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 LRRC7Q96NW7 1537 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 NUPL2O15504 423 aaKnown RBP11.52□□□□□ -0.57
TCF4-248ENST00000616053 CBR3O75828 277 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 HNRNPA3P51991 378 aaKnown RBP11.52□□□□□ -0.57
TCF4-248ENST00000616053 FAM189BP81408 668 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 PRSS35Q8N3Z0 413 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 OR10V1Q8NGI7 309 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 FAM53CQ9NYF3 392 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 CTSFQ9UBX1 484 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 STAG3L2P0CL84 134 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 ANGPTL5Q86XS5 388 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 UMODL1-AS1Q8N2C9 162 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 C5orf17Q8NAS9 161 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 OR6K3Q8NGY3 331 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 BANF2Q9H503 90 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 NPIPB6E9PJ23 425 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 M0R1X1 148 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 OR13C7P0DN81 318 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 FGF7P21781 194 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 BSGP35613 385 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 PIGAP37287 484 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 FAM3AP98173 230 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 COMMD1Q8N668 190 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 OR5M8Q8NGP6 311 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 ATG101Q9BSB4 218 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 RSG1Q9BU20 258 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 SLC46A2Q9BY10 475 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 BTNL2Q9UIR0 455 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 ZNF724A8MTY0 619 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 LRRC15Q8TF66 581 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 ARHGDIGQ99819 225 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 OR51J1Q9H342 316 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 HEXA-AS1Q9H8Q6 139 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 SDR39U1Q9NRG7 319 aaPredicted RBP11.51□□□□□ -0.57
TCF4-248ENST00000616053 TOX3O15405 576 aaPredicted RBP11.51□□□□□ -0.57
TCF4-248ENST00000616053 PPP1R11O60927 126 aaPredicted RBP11.51□□□□□ -0.57
TCF4-248ENST00000616053 PNPP00491 289 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 OPRD1P41143 372 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 GPM6AP51674 278 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 LAIR1Q6GTX8 287 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 TEX261Q6UWH6 196 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 CBARPQ8N350 705 aaPredicted RBP11.51□□□□□ -0.57
TCF4-248ENST00000616053 ZNF441Q8N8Z8 693 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 OR2B2Q9GZK3 357 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 DOK5Q9P104 306 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 QRICH2Q9H0J4 1663 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 EEDO75530 441 aaKnown RBP11.51□□□□□ -0.57
TCF4-248ENST00000616053 PPP1R17O96001 155 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 ZNF658BQ4V348 819 aaPredicted RBP11.51□□□□□ -0.57
TCF4-248ENST00000616053 RAX2Q96IS3 184 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 ZNF701M0R085 212 aaPredicted RBP11.51□□□□□ -0.57
TCF4-248ENST00000616053 SNAP29O95721 258 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 ACP1P24666 158 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 NAT8LQ8N9F0 302 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 GDPD1Q8N9F7 314 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 SLC26A10Q8NG04 563 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 OR1L3Q8NH93 324 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 SCARB1Q8WTV0 552 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 PELI1Q96FA3 418 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 DDOQ99489 341 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 ADAT1Q9BUB4 502 aaKnown RBP11.51□□□□□ -0.57
TCF4-248ENST00000616053 ZNF552Q9H707 407 aaPredicted RBP11.51□□□□□ -0.57
TCF4-248ENST00000616053 HTR1DP28221 377 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 RPL22L1Q6P5R6 122 aaKnown RBP11.51□□□□□ -0.57
TCF4-248ENST00000616053 NEURL2Q9BR09 285 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 ZNF426Q9BUY5 554 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 AK3Q9UIJ7 227 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 ADGRB2O60241 1585 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 HLA-GP17693 338 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 CCL27Q9Y4X3 112 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 PTGDR2Q9Y5Y4 395 aa11.51□□□□□ -0.57
TCF4-248ENST00000616053 DIP2AQ14689 1571 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 PRSS44E7EML9 344 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 ELAVL1Q15717 326 aaKnown RBP11.5□□□□□ -0.57
TCF4-248ENST00000616053 NKAIN3Q8N8D7 197 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 OR13D1Q8NGV5 346 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 VGLL1Q99990 258 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 FKBP11Q9NYL4 201 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 hADV38S2A0JD32 116 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 DHRS3O75911 302 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 TIPARPQ7Z3E1 657 aaKnown RBP11.5□□□□□ -0.57
TCF4-248ENST00000616053 PARP16Q8N5Y8 322 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 RELL2Q8NC24 303 aaPredicted RBP11.5□□□□□ -0.57
TCF4-248ENST00000616053 TNFRSF13CQ96RJ3 184 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 SEC22CQ9BRL7 303 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 LGALS13Q9UHV8 139 aa11.5□□□□□ -0.57
TCF4-248ENST00000616053 A1L4Q6 167 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms