RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 SUMO1P63165 101 aaKnown RBP17.1■□□□□ 0.33
SPAST-203ENST00000615843 IFITM3Q01628 133 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 NR0B2Q15466 257 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 TTC9Q92623 222 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 FAM234AQ9H0X4 552 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 CHST11Q9NPF2 352 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 CA14Q9ULX7 337 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 FAM96BQ9Y3D0 163 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 MMP24Q9Y5R2 645 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 SLCO1B1Q9Y6L6 691 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 PLSCR5A0PG75 271 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 PAX6P26367 422 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 DHRS2Q13268 280 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 FAM78AQ5JUQ0 283 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 ZNF429Q86V71 674 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 LHFPL5Q8TAF8 219 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 RTN4IP1Q8WWV3 396 aaPredicted RBP17.1■□□□□ 0.33
SPAST-203ENST00000615843 MTCH1Q9NZJ7 389 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 NXPH2O95156 264 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 ZNF813Q6ZN06 617 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 SSX7Q7RTT5 188 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 FAM24BQ8N5W8 94 aa17.1■□□□□ 0.33
SPAST-203ENST00000615843 RBMXL3Q8N7X1 1067 aaKnown RBP17.1■□□□□ 0.33
SPAST-203ENST00000615843 TCRBV16S1A1N1A0A5B0 115 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 FAM26DQ5JW98 314 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 OTPQ5XKR4 325 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 LANCL3Q6ZV70 420 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 ARRDC1Q8N5I2 433 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 WBP2Q969T9 261 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 ZC3HAV1LQ96H79 300 aaKnown RBP17.09■□□□□ 0.33
SPAST-203ENST00000615843 EXOGQ9Y2C4 368 aaKnown RBP17.09■□□□□ 0.33
SPAST-203ENST00000615843 RAB5AP20339 215 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 ZDHHC22Q8N966 263 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 CMBLQ96DG6 245 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 MS4A4AQ96JQ5 239 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 ACTR3CQ9C0K3 210 aaPredicted RBP17.09■□□□□ 0.33
SPAST-203ENST00000615843 MAGT1Q9H0U3 335 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 S1PR5Q9H228 398 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 MBNL1Q9NR56 388 aaKnown RBP17.09■□□□□ 0.33
SPAST-203ENST00000615843 NSG1A0A0A6YYJ2 146 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 POM121BA6NF01 834 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 OLFM2O95897 454 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 APOBEC1P41238 236 aaKnown RBP17.09■□□□□ 0.33
SPAST-203ENST00000615843 EMDP50402 254 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 HGDQ93099 445 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 C19orf43Q9BQ61 176 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 SLC35D1Q9NTN3 355 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 CXCL3P19876 107 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 RANP62826 216 aaKnown RBP17.09■□□□□ 0.33
SPAST-203ENST00000615843 AGBL4Q5VU57 503 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 C8orf82Q6P1X6 216 aaPredicted RBP17.09■□□□□ 0.33
SPAST-203ENST00000615843 BATF2Q8N1L9 274 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 GPR32P1Q8NGA4 272 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 LHX6Q9UPM6 363 aa17.09■□□□□ 0.33
SPAST-203ENST00000615843 EDN3P14138 238 aa17.08■□□□□ 0.33
SPAST-203ENST00000615843 DPTQ07507 201 aa17.08■□□□□ 0.33
SPAST-203ENST00000615843 ZNF296Q8WUU4 475 aaPredicted RBP17.08■□□□□ 0.33
SPAST-203ENST00000615843 PBOV1Q9GZY1 135 aa17.08■□□□□ 0.33
SPAST-203ENST00000615843 RNF165Q6ZSG1 346 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 OR6S1Q8NH40 331 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 PELI1Q96FA3 418 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 ZNF230Q9UIE0 474 aaPredicted RBP17.08■□□□□ 0.32
SPAST-203ENST00000615843 NOSIPQ9Y314 301 aaKnown RBP17.08■□□□□ 0.32
SPAST-203ENST00000615843 GUSBP08236 651 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 CD22P20273 847 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 RAE1P78406 368 aaKnown RBP17.08■□□□□ 0.32
SPAST-203ENST00000615843 IL10RAQ13651 578 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 H2BFWTQ7Z2G1 175 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 PRRX2Q99811 253 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 MIXL1Q9H2W2 232 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 RCL1Q9Y2P8 373 aaKnown RBP17.08■□□□□ 0.32
SPAST-203ENST00000615843 KCNE3Q9Y6H6 103 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 NUP205Q92621 2012 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 ZNF320A2RRD8 509 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 TIMP1P01033 207 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 PPP1R3BQ86XI6 285 aa17.08■□□□□ 0.32
SPAST-203ENST00000615843 FAM221AA4D161 298 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 YKT6O15498 198 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 ENPP1P22413 925 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 KIRREL2Q6UWL6 708 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 S100A7AQ86SG5 101 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 SLC35G3Q8N808 338 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 OR51F2Q8NH61 342 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 NUDT9Q9BW91 350 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 PRO1933Q9H354 126 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 SLC17A5Q9NRA2 495 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 ZNF814B7Z6K7 855 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 QDPRP09417 244 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 DTYMKP23919 212 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 CD38P28907 300 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 SYT13Q7L8C5 426 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 LAT2Q9GZY6 243 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 A6NCN8 305 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 PLA2G10O15496 165 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 KCNJ3P48549 501 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 B4GALNT1Q00973 533 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 LYPD8Q6UX82 237 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 TXNIPQ9H3M7 391 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 FGF22Q9HCT0 170 aa17.07■□□□□ 0.32
SPAST-203ENST00000615843 CCDC187A0A096LP49 1063 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms