RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 KRT72Q14CN4 511 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 SLC36A3Q495N2 470 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 HIST2H3PS2Q5TEC6 136 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 SMARCD3Q6STE5 483 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 FIP1L1Q6UN15 594 aaKnown RBP14.88□□□□□ -0.03
SMN2-213ENST00000614240 HIST2H3AQ71DI3 136 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 LINC00346Q8IVM7 164 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 KIR3DL3Q8N743 410 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 BOLLQ8N9W6 283 aaKnown RBP14.88□□□□□ -0.03
SMN2-213ENST00000614240 OR52J3Q8NH60 311 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 ERGIC1Q969X5 290 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 DACT3Q96B18 629 aaPredicted RBP14.88□□□□□ -0.03
SMN2-213ENST00000614240 SLCO4A1Q96BD0 722 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 KCTD14Q9BQ13 255 aaPredicted RBP14.88□□□□□ -0.03
SMN2-213ENST00000614240 MARCH7Q9H992 704 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 NOX4Q9NPH5 578 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 B9D1Q9UPM9 204 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 PKD1L1Q8TDX9 2849 aa14.88□□□□□ -0.03
SMN2-213ENST00000614240 DCTN6O00399 190 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 NDUFAB1O14561 156 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 FAM20BO75063 409 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 ACSM4P0C7M7 580 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 COX4I1P13073 169 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 RHCEP18577 417 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 MDH1P40925 334 aaKnown RBP14.87□□□□□ -0.03
SMN2-213ENST00000614240 MAB21L1Q13394 359 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 GK2Q14410 553 aaPredicted RBP14.87□□□□□ -0.03
SMN2-213ENST00000614240 OR8G1Q15617 311 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 KCNJ8Q15842 424 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 PRAMEF6Q5VXH4 476 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 CD276Q5ZPR3 534 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 CGB2Q6NT52 195 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 COLCA1Q6ZS62 124 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 PGAP1Q75T13 922 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 MRPL21Q7Z2W9 205 aaKnown RBP14.87□□□□□ -0.03
SMN2-213ENST00000614240 TSEN54Q7Z6J9 526 aaKnown RBP14.87□□□□□ -0.03
SMN2-213ENST00000614240 CELF2-AS1Q8N7Q2 184 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 NMNAT3Q96T66 252 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 EFCAB1Q9HAE3 211 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 ERVK-18Q9QC07 812 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 TMCC3Q9ULS5 477 aa14.87□□□□□ -0.03
SMN2-213ENST00000614240 TRBV4-1A0A0J9YWV2 114 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 NOS3P29474 1203 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 NPY4RP50391 375 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 FXYD6P3P58550 94 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 TRAP1Q12931 704 aaKnown RBP14.86□□□□□ -0.03
SMN2-213ENST00000614240 OR8B8Q15620 311 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 RSPO1Q2MKA7 263 aaPredicted RBP14.86□□□□□ -0.03
SMN2-213ENST00000614240 RUSC1-AS1Q66K80 236 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 Q6YL49 198 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 CFAP77Q6ZQR2 320 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 OR6V1Q8N148 313 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 OR4K13Q8NH42 304 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 FANK1Q8TC84 345 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 Q8TCH9 128 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 FAM71F1Q96KD3 344 aaPredicted RBP14.86□□□□□ -0.03
SMN2-213ENST00000614240 CCT8L2Q96SF2 557 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 ATF6BQ99941 703 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 PRDM13Q9H4Q3 707 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 FN3KRPQ9HA64 309 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 RPRD1BQ9NQG5 326 aaKnown RBP14.86□□□□□ -0.03
SMN2-213ENST00000614240 NDUFAF4Q9P032 175 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 RNF7Q9UBF6 113 aa14.86□□□□□ -0.03
SMN2-213ENST00000614240 NOP16Q9Y3C1 178 aaKnown RBP14.86□□□□□ -0.03
SMN2-213ENST00000614240 IGLV1-36A0A0B4J1U3 117 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 C22orf46C9J442 243 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 P2RY10O00398 339 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 GMNNO75496 209 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 TOX4O94842 621 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 LIPFP07098 398 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 CA6P23280 308 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 SLC6A6P31641 620 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 GGT2P36268 569 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 CFHR2P36980 270 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 CD200P41217 278 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 TPTEP56180 551 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 SRSF4Q08170 494 aaKnown RBP14.85□□□□□ -0.03
SMN2-213ENST00000614240 SEC23BQ15437 767 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 MPPED2Q15777 294 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 OLFML2AQ68BL7 652 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 SFRP4Q6FHJ7 346 aaPredicted RBP14.85□□□□□ -0.03
SMN2-213ENST00000614240 SLC18B1Q6NT16 456 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 BRICD5Q6PL45 260 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 ZNF841Q6ZN19 808 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 NAA40Q86UY6 237 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 SLC26A10Q8NG04 563 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 WFDC12Q8WWY7 111 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 IFT27Q9BW83 186 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 CHIAQ9BZP6 476 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 SLC22A4Q9H015 551 aa14.85□□□□□ -0.03
SMN2-213ENST00000614240 NSRP1Q9H0G5 558 aaKnown RBP14.85□□□□□ -0.03
SMN2-213ENST00000614240 A0A1B0GWJ7 208 aa14.84□□□□□ -0.03
SMN2-213ENST00000614240 ZNF879B4DU55 563 aa14.84□□□□□ -0.03
SMN2-213ENST00000614240 LGALS8O00214 317 aa14.84□□□□□ -0.03
SMN2-213ENST00000614240 DIRAS1O95057 198 aa14.84□□□□□ -0.03
SMN2-213ENST00000614240 SFTPBP07988 381 aa14.84□□□□□ -0.03
SMN2-213ENST00000614240 PSMB10P40306 273 aa14.84□□□□□ -0.03
SMN2-213ENST00000614240 NUDT2P50583 147 aa14.84□□□□□ -0.03
SMN2-213ENST00000614240 SMIM11AP58511 58 aa14.84□□□□□ -0.03
SMN2-213ENST00000614240 RFX4Q33E94 735 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms