RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 FAM90A1Q86YD7 464 aa8.34□□□□□ -1.07
SSX3-204ENST00000612497 Q8N2B8 174 aa8.34□□□□□ -1.07
SSX3-204ENST00000612497 SMYD1Q8NB12 490 aa8.34□□□□□ -1.07
SSX3-204ENST00000612497 Q8NFD4 153 aa8.34□□□□□ -1.07
SSX3-204ENST00000612497 OR1F12Q8NHA8 337 aa8.34□□□□□ -1.07
SSX3-204ENST00000612497 FNDC8Q8TC99 324 aa8.34□□□□□ -1.07
SSX3-204ENST00000612497 ADAMTS16Q8TE57 1224 aa8.34□□□□□ -1.07
SSX3-204ENST00000612497 TNFRSF14Q92956 283 aa8.34□□□□□ -1.07
SSX3-204ENST00000612497 APOBEC3DQ96AK3 386 aaPredicted RBP8.34□□□□□ -1.07
SSX3-204ENST00000612497 WNT10AQ9GZT5 417 aa8.34□□□□□ -1.07
SSX3-204ENST00000612497 TXNIPQ9H3M7 391 aa8.34□□□□□ -1.07
SSX3-204ENST00000612497 EVA1AQ9H8M9 152 aa8.34□□□□□ -1.07
SSX3-204ENST00000612497 PPCSQ9HAB8 311 aa8.34□□□□□ -1.07
SSX3-204ENST00000612497 MEPEQ9NQ76 525 aaPredicted RBP8.34□□□□□ -1.07
SSX3-204ENST00000612497 NKX1-2Q9UD57 310 aaPredicted RBP8.34□□□□□ -1.07
SSX3-204ENST00000612497 TRBV23-1A0A0A0MS06 115 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 TCRBV4S1A1TA0A5B7 111 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 TRAPPC13A5PLN9 417 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 MEGF11A6BM72 1044 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 SLC22A3O75751 556 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 OR7A10O76100 309 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 ABCE1P61221 599 aaKnown RBP8.33□□□□□ -1.08
SSX3-204ENST00000612497 CD83Q01151 205 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 ECH1Q13011 328 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 OR8G1Q15617 311 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 AANATQ16613 207 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 CCDC121Q6ZUS5 278 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 OR5AU1Q8NGC0 362 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 OR6T1Q8NGN1 323 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 MPP4Q96JB8 637 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 DMRTB1Q96MA1 342 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 CCL13Q99616 98 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 CDCA4Q9BXL8 241 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 PRSS22Q9GZN4 317 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 MEGF9Q9H1U4 602 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 C1orf123Q9NWV4 160 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 KAAG1Q9UBP8 84 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 SF3B6Q9Y3B4 125 aaKnown RBP8.33□□□□□ -1.08
SSX3-204ENST00000612497 RAP2CQ9Y3L5 183 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 HYDINQ4G0P3 5121 aa8.33□□□□□ -1.08
SSX3-204ENST00000612497 A0A1B0GW55 424 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 hCG_1807616A0A1W2PRN6 198 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 TLDC2A0PJX2 215 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 OR6C6A6NF89 314 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 NPIPB13A6NJU9 1138 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 A6NLC8 198 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 NPIPB4C9JG80 1138 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 NDUFB3O43676 98 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 MT-ND1P03886 318 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 SERPINE1P05121 402 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 VIMP08670 466 aaKnown RBP8.32□□□□□ -1.08
SSX3-204ENST00000612497 DUX4L2P0CJ85 424 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 DUX4L3P0CJ86 424 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 DUX4L4P0CJ87 422 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 DUX4L5P0CJ88 424 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 DUX4L6P0CJ89 424 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 DUX4L7P0CJ90 424 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 RPL27P61353 136 aaKnown RBP8.32□□□□□ -1.08
SSX3-204ENST00000612497 SCARB2Q14108 478 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 NPTX1Q15818 432 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 WHAMMP3Q1A5X7 153 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 OTPQ5XKR4 325 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 DUX4L9Q6RFH8 374 aaPredicted RBP8.32□□□□□ -1.08
SSX3-204ENST00000612497 ZNF826PQ6ZT77 177 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 RBM45Q8IUH3 476 aaKnown RBP8.32□□□□□ -1.08
SSX3-204ENST00000612497 IFT20Q8IY31 132 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 PFN4Q8NHR9 129 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 UBLCP1Q8WVY7 318 aaPredicted RBP8.32□□□□□ -1.08
SSX3-204ENST00000612497 SPRYD4Q8WW59 207 aaPredicted RBP8.32□□□□□ -1.08
SSX3-204ENST00000612497 H1FXQ92522 213 aaKnown RBP8.32□□□□□ -1.08
SSX3-204ENST00000612497 SGTBQ96EQ0 304 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 ZNF426Q9BUY5 554 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 C20orf27Q9GZN8 174 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 PAIP1Q9H074 479 aaKnown RBP8.32□□□□□ -1.08
SSX3-204ENST00000612497 METTL8Q9H825 291 aaKnown RBP8.32□□□□□ -1.08
SSX3-204ENST00000612497 DUX4Q9UBX2 424 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 AURKCQ9UQB9 309 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 CAPN7Q9Y6W3 813 aa8.32□□□□□ -1.08
SSX3-204ENST00000612497 CSMD3Q7Z407 3707 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 GRPP07492 148 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 PAICSP22234 425 aaKnown RBP8.31□□□□□ -1.08
SSX3-204ENST00000612497 CA6P23280 308 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 VDAC2P45880 294 aaPredicted RBP8.31□□□□□ -1.08
SSX3-204ENST00000612497 ELF3P78545 371 aaPredicted RBP8.31□□□□□ -1.08
SSX3-204ENST00000612497 DGCR2P98153 550 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 IKZF1Q13422 519 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 AQP6Q13520 282 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 BLMHQ13867 455 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 CNN3Q15417 329 aaKnown RBP8.31□□□□□ -1.08
SSX3-204ENST00000612497 TMEM95Q3KNT9 176 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 CCDC92Q53HC0 331 aaPredicted RBP8.31□□□□□ -1.08
SSX3-204ENST00000612497 ALG10Q5BKT4 473 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 KHDC1LQ5JSQ8 128 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 WDR38Q5JTN6 314 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 ZFAND6Q6FIF0 208 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 UNQ9370/PRO34162Q6UXP9 181 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 MSANTD1Q6ZTZ1 278 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 SLC36A1Q7Z2H8 476 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 GCSAMQ8N6F7 178 aa8.31□□□□□ -1.08
SSX3-204ENST00000612497 FAM216BQ8N7L0 139 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms