RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 MS4A3Q96HJ5 214 aa13.84□□□□□ -0.19
CLTCL1-207ENST00000611723 DOK1Q99704 481 aa13.84□□□□□ -0.19
CLTCL1-207ENST00000611723 C1QTNF6Q9BXI9 259 aa13.84□□□□□ -0.19
CLTCL1-207ENST00000611723 C1QTNF5Q9BXJ0 243 aa13.84□□□□□ -0.19
CLTCL1-207ENST00000611723 MOB1AQ9H8S9 216 aa13.84□□□□□ -0.19
CLTCL1-207ENST00000611723 NPDC1Q9NQX5 325 aaPredicted RBP13.84□□□□□ -0.19
CLTCL1-207ENST00000611723 NPAP1Q9NZP6 1156 aa13.84□□□□□ -0.19
CLTCL1-207ENST00000611723 FRRS1LQ9P0K9 344 aa13.84□□□□□ -0.19
CLTCL1-207ENST00000611723 GRIP1Q9Y3R0 1128 aa13.84□□□□□ -0.19
CLTCL1-207ENST00000611723 SIRT4Q9Y6E7 314 aaPredicted RBP13.84□□□□□ -0.19
CLTCL1-207ENST00000611723 C5orf49A4QMS7 147 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 CECR9P0C854 216 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 HSMCR30P0CW71 290 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 ZNF35P13682 527 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 PSMB9P28065 219 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 NANOS3P60323 173 aaKnown RBP13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 BLMHQ13867 455 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 ZNF544Q6NX49 715 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 NAA40Q86UY6 237 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 MYPOPQ86VE0 399 aaPredicted RBP13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 ELMOD2Q8IZ81 293 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 PRSS35Q8N3Z0 413 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 UFD1Q92890 307 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 C4orf45Q96LM5 186 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 DACH2Q96NX9 599 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 MED18Q9BUE0 208 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 NGBQ9NPG2 151 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 TBCCD1Q9NVR7 557 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 NUFIP1Q9UHK0 495 aaKnown RBP13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 OR52A1Q9UKL2 312 aa13.83□□□□□ -0.2
CLTCL1-207ENST00000611723 HEATR1Q9H583 2144 aaKnown RBP13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 DOPEY1Q5JWR5 2465 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 ITPR2Q14571 2701 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 TRBV2A0A0J9YWF9 115 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 OR4C45A6NMZ5 311 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 LOC110117498-PIK3R3F6TDL0 507 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 J3QW42 95 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 PCSK6P29122 969 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 KIR3DL2P43630 455 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 RGS6P49758 472 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 HGFACQ04756 655 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 MFGE8Q08431 387 aaPredicted RBP13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 WDR38Q5JTN6 314 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 ARL9Q6T311 187 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 PHC2Q8IXK0 858 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 OR52H1Q8NGJ2 320 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 OR13F1Q8NGS4 319 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 SMIM19Q96E16 107 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 PBOV1Q9GZY1 135 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 KLF2Q9Y5W3 355 aaPredicted RBP13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 CADP27708 2225 aa13.82□□□□□ -0.2
CLTCL1-207ENST00000611723 TUBAL3A6NHL2 446 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 TMEM212A6NML5 194 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 GPRIN2O60269 458 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 ISG15P05161 165 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 CCL2P13500 99 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 IGFBP2P18065 325 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 CELP19835 753 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 PTAFRP25105 342 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 CD40P25942 277 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 LIPAP38571 399 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 WNT5AP41221 380 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 ZNF83P51522 516 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 NAAAQ02083 359 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 SSX1Q16384 188 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 TSTQ16762 297 aaKnown RBP13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 ZNF704Q6ZNC4 412 aaPredicted RBP13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 FAM57BQ71RH2 274 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 WFDC8Q8IUA0 241 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 PAQR4Q8N4S7 273 aaPredicted RBP13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 ZFP41Q8N8Y5 198 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 ACBD4Q8NC06 268 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 LINC01560Q8TB33 94 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 APOBEC3DQ96AK3 386 aaPredicted RBP13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 TMIGD2Q96BF3 282 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 PGLYRP3Q96LB9 341 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 CDH20Q9HBT6 801 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 ZNF319Q9P2F9 582 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 SLC22A13Q9Y226 551 aa13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 SF3B6Q9Y3B4 125 aaKnown RBP13.81□□□□□ -0.2
CLTCL1-207ENST00000611723 IGHV2OR16-5A0A0B4J2B6 119 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 A0A0U1RQV5 110 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 M0R1B8 84 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 CCRL2O00421 344 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 ZFPL1O95159 310 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 CLDN1O95832 211 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 IGLV3-1P01715 115 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 TTRP02766 147 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 LCATP04180 440 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 ANXA2P07355 339 aaKnown RBP13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 SLC2A1P11166 492 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 CCNOP22674 350 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 TUBG1P23258 451 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 TTKP33981 857 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 SLC6A9P48067 706 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 BCL2L15Q5TBC7 163 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 LIPKQ5VXJ0 399 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 TMEM108Q6UXF1 575 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 C1orf174Q8IYL3 243 aa13.8□□□□□ -0.2
CLTCL1-207ENST00000611723 MS4A15Q8N5U1 240 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms