RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	HS3ST3A1	Q9Y663	406 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	TDRD15	B5MCY1	1934 aa	Known RBP	12.48	□□□□□ -0.41
MUC1-223	ENST00000611571		H3BMH7	237 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	SEMA7A	O75326	666 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	CAPZB	P47756	277 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	SHE	Q5VZ18	495 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	ZNF321P	Q8N8H1	164 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	PIGM	Q9H3S5	423 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	FAM96B	Q9Y3D0	163 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	CD300LB	A8K4G0	201 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	SPINT1	O43278	529 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	ALOX12B	O75342	701 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	IGHA1	P01876	353 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	CNR1	P21554	472 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	AFF3	P51826	1226 aa	Known RBP	12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	PPP1R1A	Q13522	171 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571		Q5BKY6	102 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	AVPI1	Q5T686	147 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	VASH2	Q86V25	355 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	FBXW5	Q969U6	566 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	ELSPBP1	Q96BH3	223 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	OR5B12	Q96R08	314 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	SSX3	Q99909	188 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	PBOV1	Q9GZY1	135 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	CALHM2	Q9HA72	323 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	CA10	Q9NS85	328 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	FRRS1L	Q9P0K9	344 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	MMACHC	Q9Y4U1	282 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	SPTY2D1-AS1	A0A0U1RR47	76 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	MEX3A	A1L020	520 aa	Known RBP	12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	EIF4E2	O60573	245 aa	Known RBP	12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	CTAG2	O75638	210 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	CFD	P00746	253 aa	Predicted RBP	12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	EFNB2	P52799	333 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	CLEC12B	Q2HXU8	276 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	ZNF286A	Q9HBT8	521 aa		12.48	□□□□□ -0.41
MUC1-223	ENST00000611571	ARID2	Q68CP9	1835 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	ARPC3	O15145	178 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	NANOS3	P60323	173 aa	Known RBP	12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	FOXF1	Q12946	379 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	DGAT2L6	Q6ZPD8	337 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	LINC00696	Q6ZRV3	163 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	RAB11FIP2	Q7L804	512 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	NT5C	Q8TCD5	201 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	SFT2D1	Q8WV19	159 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	C11orf40	Q8WZ69	217 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	SPIN2A	Q99865	258 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	SPIN2B	Q9BPZ2	258 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	PISD	Q9UG56	409 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	B3GALT5	Q9Y2C3	310 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	OR6C76	A6NM76	312 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	RER1	O15258	196 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	IFNA17	P01571	189 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	CHRM2	P08172	466 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	DUSP1	P28562	367 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	PEBP1	P30086	187 aa	Known RBP	12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	NKX6-1	P78426	367 aa	Predicted RBP	12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	EGR3	Q06889	387 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	TESK1	Q15569	626 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	ZNF813	Q6ZN06	617 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571		Q6ZRG5	221 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	NPEPL1	Q8NDH3	523 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	UBALD1	Q8TB05	177 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	TSPAN32	Q96QS1	320 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	TMPRSS13	Q9BYE2	586 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	LAT2	Q9GZY6	243 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	SPACA1	Q9HBV2	294 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	PCDHB10	Q9UN67	800 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	SULT1C2	O00338	296 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	MRPL33	O75394	65 aa	Known RBP	12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	ADAP1	O75689	374 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	OR2F2	O95006	317 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	ABCD3	P28288	659 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	CD96	P40200	585 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	RAB4B	P61018	213 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	HTRA4	P83105	476 aa	Predicted RBP	12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	OR2F1	Q13607	317 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	OPN5	Q6U736	354 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	CLEC9A	Q6UXN8	241 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	OR4D10	Q8NGI6	311 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	RHBDD1	Q8TEB9	315 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	LRRC61	Q9BV99	259 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	EVA1A	Q9H8M9	152 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	OBP2A	Q9NY56	170 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	NEUROG3	Q9Y4Z2	214 aa		12.47	□□□□□ -0.41
MUC1-223	ENST00000611571	DCTN6	O00399	190 aa		12.46	□□□□□ -0.41
MUC1-223	ENST00000611571	S100P	P25815	95 aa		12.46	□□□□□ -0.41
MUC1-223	ENST00000611571	FCGR2C	P31995	323 aa		12.46	□□□□□ -0.41
MUC1-223	ENST00000611571	FOLR3	P41439	243 aa		12.46	□□□□□ -0.41
MUC1-223	ENST00000611571	PLA1A	Q53H76	456 aa		12.46	□□□□□ -0.41
MUC1-223	ENST00000611571	OR11H4	Q8NGC9	324 aa		12.46	□□□□□ -0.41
MUC1-223	ENST00000611571	LIPH	Q8WWY8	451 aa		12.46	□□□□□ -0.41
MUC1-223	ENST00000611571	MRPL38	Q96DV4	380 aa	Known RBP	12.46	□□□□□ -0.41
MUC1-223	ENST00000611571	SLC19A3	Q9BZV2	496 aa		12.46	□□□□□ -0.41
MUC1-223	ENST00000611571	B4GALT7	Q9UBV7	327 aa		12.46	□□□□□ -0.41
MUC1-223	ENST00000611571		R4GMQ9	66 aa		12.46	□□□□□ -0.41
MUC1-223	ENST00000611571	KIF26B	Q2KJY2	2108 aa		12.46	□□□□□ -0.41
MUC1-223	ENST00000611571	ADRA2A	P08913	450 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms