RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CNIH2Q6PI25 160 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 FAM131AQ6UXB0 335 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 SAMD12Q8N8I0 201 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 FGGYQ96C11 551 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 RNF121Q9H920 327 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 TAS2R4Q9NYW5 299 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 MED12LQ86YW9 2145 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 A0A0U1RQV5 110 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 TTLL8A6PVC2 850 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 LMX1BO60663 402 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 UPK1BO75841 260 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 SNRPBP14678 240 aaKnown RBP18.86■□□□□ 0.61
USP6NL-204ENST00000606752 GABRA1P14867 456 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 ANOS1P23352 680 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 HES5Q5TA89 166 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 METAP1DQ6UB28 335 aaPredicted RBP18.86■□□□□ 0.61
USP6NL-204ENST00000606752 LRRC28Q86X40 367 aaPredicted RBP18.86■□□□□ 0.61
USP6NL-204ENST00000606752 COMMD2Q86X83 199 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 SNX29P2Q8IUI4 249 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 SERPINA12Q8IW75 414 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 ZNF671Q8TAW3 534 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 MRI1Q9BV20 369 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 SPATA2Q9UM82 520 aa18.86■□□□□ 0.61
USP6NL-204ENST00000606752 PRRC2CQ9Y520 2896 aaKnown RBP18.85■□□□□ 0.61
USP6NL-204ENST00000606752 FAM25AB3EWG3 89 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 FAM25CB3EWG5 89 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 FAM25GB3EWG6 89 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 E9PLN8 166 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 IL18BPO95998 194 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 ELK1P19419 428 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 PABPC1L2AQ5JQF8 200 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 TFAP2EQ6VUC0 442 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 DOK3Q7L591 496 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 DNAAF1Q8NEP3 725 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 OR52H1Q8NGJ2 320 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 SOSTQ9BQB4 213 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 CYSLTR2Q9NS75 346 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 ATPIF1Q9UII2 106 aa18.85■□□□□ 0.61
USP6NL-204ENST00000606752 RTTNQ86VV8 2226 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 A0A0B4J203 849 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 MEGF11A6BM72 1044 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 TBX1O43435 398 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 IGLV3-1P01715 115 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 ITGA5P08648 1049 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 ZNF12P17014 697 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 KIR2DL2P43627 348 aaPredicted RBP18.84■□□□□ 0.61
USP6NL-204ENST00000606752 ZNF79Q15937 498 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 ZNF181Q2M3W8 571 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 ANKRD16Q6P6B7 361 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 XKRXQ6PP77 449 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 Q8NA96 180 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 OR1K1Q8NGR3 316 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 OR1J2Q8NGS2 313 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 OR5H6Q8NGV6 325 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 SDHCQ99643 169 aaPredicted RBP18.84■□□□□ 0.61
USP6NL-204ENST00000606752 CCDC32Q9BV29 185 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 C5orf63A6NC05 138 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 WDR1O75083 606 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 CNOT4O95628 575 aaKnown RBP18.84■□□□□ 0.61
USP6NL-204ENST00000606752 HLA-HP01893 362 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 FAM87AP0C7U9 286 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 PTGER4P35408 488 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 CNEP1R1Q8N9A8 125 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 PLPP7Q8NBV4 271 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 OR5D14Q8NGL3 314 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 OR6K3Q8NGY3 331 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 ADAT3Q96EY9 351 aaPredicted RBP18.84■□□□□ 0.61
USP6NL-204ENST00000606752 FAM71F1Q96KD3 344 aaPredicted RBP18.84■□□□□ 0.61
USP6NL-204ENST00000606752 SRRQ9GZT4 340 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 OR10A2Q9H208 303 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 SP140LQ9H930 580 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 ABCB10Q9NRK6 738 aa18.84■□□□□ 0.61
USP6NL-204ENST00000606752 MBD3L4A6NDZ8 208 aaPredicted RBP18.83■□□□□ 0.6
USP6NL-204ENST00000606752 MBD3L3A6NE82 208 aaPredicted RBP18.83■□□□□ 0.6
USP6NL-204ENST00000606752 MBD3L5A6NJ08 208 aaPredicted RBP18.83■□□□□ 0.6
USP6NL-204ENST00000606752 TPOP07202 933 aa18.83■□□□□ 0.6
USP6NL-204ENST00000606752 CALCBP10092 127 aa18.83■□□□□ 0.6
USP6NL-204ENST00000606752 PTBP1P26599 531 aaKnown RBP eCLIP18.83■□□□□ 0.6
USP6NL-204ENST00000606752 CFPP27918 469 aa18.83■□□□□ 0.6
USP6NL-204ENST00000606752 ARR3P36575 388 aa18.83■□□□□ 0.6
USP6NL-204ENST00000606752 GFOD2Q3B7J2 385 aa18.83■□□□□ 0.6
USP6NL-204ENST00000606752 SFRP5Q5T4F7 317 aa18.83■□□□□ 0.6
USP6NL-204ENST00000606752 DPPA2Q7Z7J5 298 aa18.83■□□□□ 0.6
USP6NL-204ENST00000606752 CPEB3Q8NE35 698 aaKnown RBP18.83■□□□□ 0.6
USP6NL-204ENST00000606752 MBD3L2Q8NHZ7 208 aaPredicted RBP18.83■□□□□ 0.6
USP6NL-204ENST00000606752 BCL2L2Q92843 193 aaPredicted RBP18.83■□□□□ 0.6
USP6NL-204ENST00000606752 CMTM3Q96MX0 182 aa18.83■□□□□ 0.6
USP6NL-204ENST00000606752 SOX7Q9BT81 388 aa18.83■□□□□ 0.6
USP6NL-204ENST00000606752 LIN7BQ9HAP6 207 aa18.83■□□□□ 0.6
USP6NL-204ENST00000606752 SVILO95425 2214 aa18.83■□□□□ 0.6
USP6NL-204ENST00000606752 APOA1P02647 267 aa18.82■□□□□ 0.6
USP6NL-204ENST00000606752 EIF4EP06730 217 aaKnown RBP18.82■□□□□ 0.6
USP6NL-204ENST00000606752 CD37P11049 281 aa18.82■□□□□ 0.6
USP6NL-204ENST00000606752 ABOP16442 354 aa18.82■□□□□ 0.6
USP6NL-204ENST00000606752 GNALP38405 381 aa18.82■□□□□ 0.6
USP6NL-204ENST00000606752 DDOSTP39656 456 aa18.82■□□□□ 0.6
USP6NL-204ENST00000606752 LINC00303Q3SY05 128 aa18.82■□□□□ 0.6
USP6NL-204ENST00000606752 GLT8D1Q68CQ7 371 aa18.82■□□□□ 0.6
USP6NL-204ENST00000606752 CISD2Q8N5K1 135 aaKnown RBP18.82■□□□□ 0.6
USP6NL-204ENST00000606752 LYZL4Q96KX0 146 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms