RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 HKR1P10072 659 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 RPS2P15880 293 aaKnown RBP6.37□□□□□ -1.39
CUX1-219ENST00000606749 PRTN3P24158 256 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 RRM2P31350 389 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 GATA4P43694 442 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 PRSS12P56730 875 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 GNB2P62879 340 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.37□□□□□ -1.39
CUX1-219ENST00000606749 TRAP1Q12931 704 aaKnown RBP6.37□□□□□ -1.39
CUX1-219ENST00000606749 FOXL1Q12952 345 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 TSPAN31Q12999 210 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 ZNF404Q494X3 552 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 SAMD4BQ5PRF9 694 aaKnown RBP6.37□□□□□ -1.39
CUX1-219ENST00000606749 ZNF362Q5T0B9 420 aaPredicted RBP6.37□□□□□ -1.39
CUX1-219ENST00000606749 SLC35F1Q5T1Q4 408 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 PGBD2Q6P3X8 592 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 LRRN1Q6UXK5 716 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 ZNF620Q6ZNG0 422 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 CPLX4Q7Z7G2 160 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 C1orf87Q8N0U7 546 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 PGAM4Q8N0Y7 254 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 CELF2-AS1Q8N7Q2 184 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 SDR9C7Q8NEX9 313 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 RAB40AQ8WXH6 277 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 DACT3Q96B18 629 aaPredicted RBP6.37□□□□□ -1.39
CUX1-219ENST00000606749 SLCO4A1Q96BD0 722 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 NEIL1Q96FI4 390 aaPredicted RBP6.37□□□□□ -1.39
CUX1-219ENST00000606749 PLEKHA8Q96JA3 519 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 MAP6Q96JE9 813 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 NSMCE2Q96MF7 247 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 ZNF48Q96MX3 618 aaPredicted RBP6.37□□□□□ -1.39
CUX1-219ENST00000606749 DUX5Q96PT3 197 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 ZNF747Q9BV97 191 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 MS4A7Q9GZW8 240 aaPredicted RBP6.37□□□□□ -1.39
CUX1-219ENST00000606749 FAM107BQ9H098 131 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 NSRP1Q9H0G5 558 aaKnown RBP6.37□□□□□ -1.39
CUX1-219ENST00000606749 FN3KQ9H479 309 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 EGLN3Q9H6Z9 239 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 OR5V1Q9UGF6 321 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 MAGEL2Q9UJ55 1249 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 TMCC3Q9ULS5 477 aa6.37□□□□□ -1.39
CUX1-219ENST00000606749 SOX21Q9Y651 276 aaPredicted RBP6.37□□□□□ -1.39
CUX1-219ENST00000606749 TENM1Q9UKZ4 2725 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 IGHV3OR16-10A0A075B7F0 116 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 IGHV2-70DA0A0C4DH43 119 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 DNAJC9-AS1A6NH13 148 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 LRRC30A6NM36 301 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 BHLHE40O14503 412 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 ARPC2O15144 300 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 ATP8B1O43520 1251 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 KRT36O76013 467 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 PLATP00750 562 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 GASTP01350 101 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 IGHV4-38-2P0DP08 117 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 ZNF823P16415 610 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 PYCR1P32322 319 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 CD200P41217 278 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 RPS27P42677 84 aaKnown RBP6.36□□□□□ -1.39
CUX1-219ENST00000606749 RAD23AP54725 363 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 TPTEP56180 551 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 MALLQ13021 153 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 BAMBIQ13145 260 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 MPPED2Q15777 294 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 SPATS1Q496A3 300 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 CLEC12AQ5QGZ9 265 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 LYPD2Q6UXB3 125 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 BTNL3Q6UXE8 466 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 ZNF841Q6ZN19 808 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 C9orf139Q6ZV77 190 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 PGAP1Q75T13 922 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 NLRC3Q7RTR2 1065 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 ZDHHC21Q8IVQ6 265 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 PARP8Q8N3A8 854 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 CYB561A3Q8NBI2 242 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 OR8B3Q8NGG8 313 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 OR10S1Q8NGN2 331 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 Q8TCH9 128 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 SPRYD4Q8WW59 207 aaPredicted RBP6.36□□□□□ -1.39
CUX1-219ENST00000606749 ZNRF4Q8WWF5 429 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 ERGIC1Q969X5 290 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 UPRTQ96BW1 309 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 OR8B2Q96RD0 313 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 UFSP2Q9NUQ7 469 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 ARL8BQ9NVJ2 186 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 IL20Q9NYY1 176 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 TAGLN3Q9UI15 199 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 KCNG2Q9UJ96 466 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 PCDHGB1Q9Y5G3 927 aa6.36□□□□□ -1.39
CUX1-219ENST00000606749 DOCK11Q5JSL3 2073 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 C5orf63A6NC05 138 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 TVP23AA6NH52 213 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 CD300LBA8K4G0 201 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 CLDN34H7C241 214 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 M0R135 149 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 TNFRSF13BO14836 293 aaPredicted RBP6.35□□□□□ -1.39
CUX1-219ENST00000606749 TMPRSS2O15393 492 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 GMDSO60547 372 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 FAM20BO75063 409 aa6.35□□□□□ -1.39
CUX1-219ENST00000606749 RNASE1P07998 156 aaKnown RBP6.35□□□□□ -1.39
CUX1-219ENST00000606749 PSKH1P11801 424 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms