RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 SLC35F2Q8IXU6 374 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 ZNF283Q8N7M2 679 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 SETD9Q8NE22 299 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 SNX33Q8WV41 574 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 ADI1Q9BV57 179 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 MROQ9BYG7 248 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 RAB1BQ9H0U4 201 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 NIPAL2Q9H841 368 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 STARD10Q9Y365 291 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 HRNRQ86YZ3 2850 aaPredicted RBP12.24□□□□□ -0.45
CTSA-211ENST00000606066 ZNF670-ZNF695F2Z2N8 137 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 H0YJX3 145 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 ZNF254O75437 659 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 OR2T7P0C7T2 308 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 GABRB1P18505 474 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 CAPGP40121 348 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 HCCSP53701 268 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 MSMPQ1L6U9 139 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 ZNF691Q5VV52 312 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 SHEQ5VZ18 495 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 PRSS57Q6UWY2 283 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 BIVMQ86UB2 503 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 LRP11Q86VZ4 500 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 OR2T27Q8NH04 317 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 AMELYQ99218 206 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 VRK1Q99986 396 aaPredicted RBP12.23□□□□□ -0.45
CTSA-211ENST00000606066 CYSLTR2Q9NS75 346 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 TAAR3PQ9P1P4 343 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 CGGBP1Q9UFW8 167 aaPredicted RBP12.23□□□□□ -0.45
CTSA-211ENST00000606066 PCDHGB1Q9Y5G3 927 aa12.23□□□□□ -0.45
CTSA-211ENST00000606066 RAI1Q7Z5J4 1906 aaPredicted RBP12.23□□□□□ -0.45
CTSA-211ENST00000606066 NSD1Q96L73 2696 aaPredicted RBP12.22□□□□□ -0.45
CTSA-211ENST00000606066 PLSCR5A0PG75 271 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 ATP6V1G2O95670 118 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 CLPTM1O96005 669 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 ADRA2AP08913 450 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 RAC2P15153 192 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 CX3CR1P49238 355 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 ADARB1P78563 741 aaKnown RBP12.22□□□□□ -0.45
CTSA-211ENST00000606066 ROM1Q03395 351 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 EGR3Q06889 387 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 ZMAT1Q5H9K5 638 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 FBXW12Q6X9E4 464 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 NAA40Q86UY6 237 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 ZNF679Q8IYX0 411 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 OR52H1Q8NGJ2 320 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 HAVCR1Q96D42 359 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 CMBLQ96DG6 245 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 RNFT2Q96EX2 444 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 MYCBPQ99417 103 aaPredicted RBP12.22□□□□□ -0.45
CTSA-211ENST00000606066 PTTG3PQ9NZH4 202 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 KLHDC2Q9Y2U9 406 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 RRP15Q9Y3B9 282 aaKnown RBP12.22□□□□□ -0.45
CTSA-211ENST00000606066 RPL36Q9Y3U8 105 aaKnown RBP12.22□□□□□ -0.45
CTSA-211ENST00000606066 HSPE1-MOB4S4R3N1 261 aa12.22□□□□□ -0.45
CTSA-211ENST00000606066 HEATR1Q9H583 2144 aaKnown RBP12.22□□□□□ -0.45
CTSA-211ENST00000606066 TIMM8AO60220 97 aaPredicted RBP12.21□□□□□ -0.45
CTSA-211ENST00000606066 F12P00748 615 aaPredicted RBP12.21□□□□□ -0.45
CTSA-211ENST00000606066 ANXA2P07355 339 aaKnown RBP12.21□□□□□ -0.45
CTSA-211ENST00000606066 SELEP16581 610 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 KITLGP21583 273 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 DCTDP32321 178 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 MPV17P39210 176 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 ALDH3B1P43353 468 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 EFNA4P52798 201 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 CXCR4P61073 352 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 ACTC1P68032 377 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 ACTA1P68133 377 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 PSG7Q13046 419 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 MAD2L1BPQ15013 274 aaPredicted RBP12.21□□□□□ -0.45
CTSA-211ENST00000606066 ZNF322Q6U7Q0 402 aaPredicted RBP12.21□□□□□ -0.45
CTSA-211ENST00000606066 LRRN1Q6UXK5 716 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 OR10H4Q8NGA5 316 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 NRG4Q8WWG1 115 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 NEU4Q8WWR8 484 aaPredicted RBP12.21□□□□□ -0.45
CTSA-211ENST00000606066 OR8B4Q96RC9 309 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 OPA3Q9H6K4 179 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 MYEF2Q9P2K5 600 aaKnown RBP12.21□□□□□ -0.45
CTSA-211ENST00000606066 IKZF2Q9UKS7 526 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 COPS3Q9UNS2 423 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 LRP12Q9Y561 859 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 N6AMT1Q9Y5N5 214 aa12.21□□□□□ -0.45
CTSA-211ENST00000606066 ROS1P08922 2347 aa12.21□□□□□ -0.46
CTSA-211ENST00000606066 XRCC2O43543 280 aa12.2□□□□□ -0.46
CTSA-211ENST00000606066 CLIC3O95833 236 aa12.2□□□□□ -0.46
CTSA-211ENST00000606066 IGHV4-39P01824 125 aa12.2□□□□□ -0.46
CTSA-211ENST00000606066 KRT8P05787 483 aa12.2□□□□□ -0.46
CTSA-211ENST00000606066 SLC2A1P11166 492 aa12.2□□□□□ -0.46
CTSA-211ENST00000606066 RIDAP52758 137 aaKnown RBP12.2□□□□□ -0.46
CTSA-211ENST00000606066 ZNF121P58317 390 aaPredicted RBP12.2□□□□□ -0.46
CTSA-211ENST00000606066 PCGF3Q3KNV8 242 aa12.2□□□□□ -0.46
CTSA-211ENST00000606066 ALKBH6Q3KRA9 238 aa12.2□□□□□ -0.46
CTSA-211ENST00000606066 Q5PR19 223 aa12.2□□□□□ -0.46
CTSA-211ENST00000606066 PGAP1Q75T13 922 aa12.2□□□□□ -0.46
CTSA-211ENST00000606066 MRPL21Q7Z2W9 205 aaKnown RBP12.2□□□□□ -0.46
CTSA-211ENST00000606066 C8orf59Q8N0T1 100 aaPredicted RBP12.2□□□□□ -0.46
CTSA-211ENST00000606066 TFAP2CQ92754 450 aa12.2□□□□□ -0.46
CTSA-211ENST00000606066 OR10A2Q9H208 303 aa12.2□□□□□ -0.46
CTSA-211ENST00000606066 POFUT1Q9H488 388 aa12.2□□□□□ -0.46
CTSA-211ENST00000606066 AASSQ9UDR5 926 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms