RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 TVP23BQ9NYZ1 205 aa13.48□□□□□ -0.25
PPFIA4-213ENST00000601609 SONP18583 2426 aaKnown RBP13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 G3V2T6 193 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 SURF4O15260 269 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 GLCEO94923 617 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 CDK5R2Q13319 367 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 SNAPC1Q16533 368 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 PGAP1Q75T13 922 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 AMIGO2Q86SJ2 522 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 NAA40Q86UY6 237 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 OR10AD1Q8NGE0 317 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 OR10S1Q8NGN2 331 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 SPRYD4Q8WW59 207 aaPredicted RBP13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 ITLN1Q8WWA0 313 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 UTP4Q969X6 686 aaKnown RBP13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 GAL3ST1Q99999 423 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 C1QTNF5Q9BXJ0 243 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 PRRG3Q9BZD7 231 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 DDX28Q9NUL7 540 aaKnown RBP13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 LPAR3Q9UBY5 353 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 CDC42EP3Q9UKI2 254 aa13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 YLPM1P49750 1951 aaKnown RBP13.47□□□□□ -0.25
PPFIA4-213ENST00000601609 NAV3Q8IVL0 2385 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 ZFHX3Q15911 3703 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 WNT9BO14905 357 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 TBX1O43435 398 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 ANXA2P07355 339 aaKnown RBP13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 CD55P08174 381 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 ADH4P08319 380 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 SLC2A1P11166 492 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 HNF1AP20823 631 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 IGFBP5P24593 272 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 SLC15A1P46059 708 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 DAPP51397 102 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 CRISP1P54107 249 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 RAD23AP54725 363 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 CDH15P55291 814 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 GRB2P62993 217 aaKnown RBP13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 CDK5Q00535 292 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 KRTAP27-1Q3LI81 207 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 LINC01590Q5TEZ4 76 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 DRAM2Q6UX65 266 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 Q6ZR03 302 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 IL17RELQ6ZVW7 336 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 CXXC5Q7LFL8 322 aaKnown RBP13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 SHFQ7M4L6 423 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 DPY19L4Q7Z388 723 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 ZDHHC13Q8IUH4 622 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 CPOQ8IVL8 374 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 OR8G5Q8NG78 346 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 OR13G1Q8NGZ3 307 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 LRTOMTQ8WZ04 291 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 RAB39BQ96DA2 213 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 OR2V2Q96R30 315 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 KCNJ15Q99712 375 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 SEMA6AQ9H2E6 1030 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 SLC25A19Q9HC21 320 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 WIPI2Q9Y4P8 454 aa13.46□□□□□ -0.25
PPFIA4-213ENST00000601609 GGT3PA6NGU5 568 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 IQCF6A8MYZ5 107 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 B4DSR2 109 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 SELENOFO60613 162 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 NAA10P41227 235 aaPredicted RBP13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 CX3CR1P49238 355 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 GK2Q14410 553 aaPredicted RBP13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 RSPO1Q2MKA7 263 aaPredicted RBP13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 SNAI3Q3KNW1 292 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 SPRNQ5BIV9 151 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 TEX30Q5JUR7 227 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 FAHD1Q6P587 224 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 COLCA1Q6ZS62 124 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 GLCCI1Q86VQ1 547 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 OR2AE1Q8NHA4 323 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 TMEM100Q9NV29 134 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 UBAP1Q9NZ09 502 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 DNAJC27Q9NZQ0 273 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 IL19Q9UHD0 177 aa13.45□□□□□ -0.26
PPFIA4-213ENST00000601609 NIPBLQ6KC79 2804 aaeCLIP13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 IGHV3-64DA0A0J9YX35 117 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 PRODHO43272 600 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 MITFO75030 526 aaPredicted RBP13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 IFNA2P01563 188 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 H2BFMP0C1H6 154 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 SRP9P49458 86 aaKnown RBP13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 ESRRGP62508 458 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 APOFQ13790 326 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 PTGES3Q15185 160 aaKnown RBP13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 PCK2Q16822 640 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 KRTAP21-3Q3LHN1 58 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 LCN1P1Q5VSP4 162 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 PARP8Q8N3A8 854 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 BBS1Q8NFJ9 593 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 ST7LQ8TDW4 575 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 THEM6Q8WUY1 208 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 PYDC1Q8WXC3 89 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 ABHD6Q9BV23 337 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 TOR3AQ9H497 397 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 ZNF665Q9H7R5 613 aa13.44□□□□□ -0.26
PPFIA4-213ENST00000601609 BRD7Q9NPI1 651 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms