RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	SLAMF6	Q96DU3	332 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	TIMD4	Q96H15	378 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	OR2V2	Q96R30	315 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	ZNF665	Q9H7R5	613 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	IL19	Q9UHD0	177 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	FBN1	P35555	2871 aa	Known RBP	13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	COL6A5	A8TX70	2615 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948		A0A1B0GWJ7	208 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	SURF4	O15260	269 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	IFNA2	P01563	188 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	IGHV2-5	P01817	119 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	MSMB	P08118	114 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	SRD5A1	P18405	259 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	TNFRSF1A	P19438	455 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	HNF1A	P20823	631 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	PRSS12	P56730	875 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	GLCCI1	Q86VQ1	547 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	ZNF283	Q8N7M2	679 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	ATG16L2	Q8NAA4	619 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	OR10AD1	Q8NGE0	317 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	OR13G1	Q8NGZ3	307 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	NRBF2	Q96F24	287 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	ZNF582	Q96NG8	517 aa	Predicted RBP	13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	SLC30A2	Q9BRI3	323 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	MARCH7	Q9H992	704 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	LPAR2	Q9HBW0	351 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	TMEM106B	Q9NUM4	274 aa		13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.08	□□□□□ -0.32
PLD3-223	ENST00000600948	C5orf63	A6NC05	138 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	ZNF878	C9JN71	531 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948		H0YL77	283 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	MLNR	O43193	412 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	GLCE	O94923	617 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	HMGN1	P05114	100 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	SELE	P16581	610 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	PAICS	P22234	425 aa	Known RBP	13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	SLC6A9	P48067	706 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	MALL	Q13021	153 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	SNAI3	Q3KNW1	292 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	FAHD1	Q6P587	224 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	DRAM2	Q6UX65	266 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	TIGD4	Q8IY51	512 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	BHLHE23	Q8NDY6	225 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	OR6N2	Q8NGY6	317 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	TMEM186	Q96B77	213 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	OTULIN	Q96BN8	352 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	RAB39B	Q96DA2	213 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	MEGF10	Q96KG7	1140 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	INTS14	Q96SY0	518 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	KCNJ15	Q99712	375 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	MDFI	Q99750	246 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	COPS4	Q9BT78	406 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	SLC25A19	Q9HC21	320 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	CENPM	Q9NSP4	180 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	HIF1AN	Q9NWT6	349 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	NPTN	Q9Y639	398 aa		13.07	□□□□□ -0.32
PLD3-223	ENST00000600948	CUBN	O60494	3623 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	PRR23D1	E9PI22	279 aa	Predicted RBP	13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	IGHV2-70	P01814	119 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	GSTT1	P30711	240 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	PRKX	P51817	358 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	ZNF92	Q03936	586 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	EIF2B1	Q14232	305 aa	Known RBP	13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	ATP6AP1	Q15904	470 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	TMEM236	Q5W0B7	351 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	PLBD1	Q6P4A8	553 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	PGAP1	Q75T13	922 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	MRPL21	Q7Z2W9	205 aa	Known RBP	13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	DPY19L4	Q7Z388	723 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	PEG10	Q86TG7	708 aa	Known RBP	13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	ERI1	Q8IV48	349 aa	Known RBP	13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	OR51F2	Q8NH61	342 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	OR5K1	Q8NHB7	308 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	DNAJC9	Q8WXX5	260 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	SIGLEC11	Q96RL6	698 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	GAL3ST1	Q99999	423 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	OR51V1	Q9H2C8	321 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	PPP1R3C	Q9UQK1	317 aa		13.06	□□□□□ -0.32
PLD3-223	ENST00000600948	TRAV20	A0A0B4J274	112 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	ISPD	A4D126	451 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948		F5H5P2	479 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	ANPEP	P15144	967 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	PCMT1	P22061	227 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	DAP	P51397	102 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	MMP16	P51512	607 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	TAF13	Q15543	124 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	GLYATL3	Q5SZD4	288 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	C1orf146	Q5VVC0	180 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	SPATC1	Q76KD6	591 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	CPO	Q8IVL8	374 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	OR2AE1	Q8NHA4	323 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	RNF133	Q8WVZ7	376 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	ZMYND19	Q96E35	227 aa	Predicted RBP	13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	DUS3L	Q96G46	650 aa	Known RBP	13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	AMELY	Q99218	206 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	ABHD6	Q9BV23	337 aa		13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	REPIN1	Q9BWE0	567 aa	Known RBP	13.05	□□□□□ -0.32
PLD3-223	ENST00000600948	GCM1	Q9NP62	436 aa		13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms