RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 OTX1P32242 354 aaPredicted RBP17.58■□□□□ 0.41
PNKP-214ENST00000600573 RFX2P48378 723 aa17.58■□□□□ 0.41
PNKP-214ENST00000600573 TBR1Q16650 682 aa17.58■□□□□ 0.41
PNKP-214ENST00000600573 MZT2BQ6NZ67 158 aa17.58■□□□□ 0.41
PNKP-214ENST00000600573 ZNF813Q6ZN06 617 aa17.58■□□□□ 0.41
PNKP-214ENST00000600573 NRARPQ7Z6K4 114 aa17.58■□□□□ 0.41
PNKP-214ENST00000600573 RFT1Q96AA3 541 aa17.58■□□□□ 0.41
PNKP-214ENST00000600573 C11orf54Q9H0W9 315 aaPredicted RBP17.58■□□□□ 0.41
PNKP-214ENST00000600573 STEAP1Q9UHE8 339 aa17.58■□□□□ 0.41
PNKP-214ENST00000600573 CLEC4AQ9UMR7 237 aa17.58■□□□□ 0.41
PNKP-214ENST00000600573 SLC5A6Q9Y289 635 aa17.58■□□□□ 0.41
PNKP-214ENST00000600573 P2RY10O00398 339 aa17.58■□□□□ 0.4
PNKP-214ENST00000600573 TTRP02766 147 aa17.58■□□□□ 0.4
PNKP-214ENST00000600573 ACSM4P0C7M7 580 aa17.58■□□□□ 0.4
PNKP-214ENST00000600573 IGFBP3P17936 291 aaPredicted RBP17.58■□□□□ 0.4
PNKP-214ENST00000600573 PTGER4P35408 488 aa17.58■□□□□ 0.4
PNKP-214ENST00000600573 MAP2K3P46734 347 aa17.58■□□□□ 0.4
PNKP-214ENST00000600573 PRKXP51817 358 aa17.58■□□□□ 0.4
PNKP-214ENST00000600573 SLC36A2Q495M3 483 aa17.58■□□□□ 0.4
PNKP-214ENST00000600573 DNAAF1Q8NEP3 725 aa17.58■□□□□ 0.4
PNKP-214ENST00000600573 RAB40AQ8WXH6 277 aa17.58■□□□□ 0.4
PNKP-214ENST00000600573 SLC25A38Q96DW6 304 aa17.58■□□□□ 0.4
PNKP-214ENST00000600573 TAS2R4Q9NYW5 299 aa17.58■□□□□ 0.4
PNKP-214ENST00000600573 OR5V1Q9UGF6 321 aa17.58■□□□□ 0.4
PNKP-214ENST00000600573 A0A1B0GVI7 797 aa17.57■□□□□ 0.4
PNKP-214ENST00000600573 SYT7O43581 403 aa17.57■□□□□ 0.4
PNKP-214ENST00000600573 CNOT4O95628 575 aaKnown RBP17.57■□□□□ 0.4
PNKP-214ENST00000600573 PDGFAP04085 211 aa17.57■□□□□ 0.4
PNKP-214ENST00000600573 B4GALT1P15291 398 aa17.57■□□□□ 0.4
PNKP-214ENST00000600573 TPTEP56180 551 aa17.57■□□□□ 0.4
PNKP-214ENST00000600573 ZNF121P58317 390 aaPredicted RBP17.57■□□□□ 0.4
PNKP-214ENST00000600573 FBXW9Q5XUX1 488 aa17.57■□□□□ 0.4
PNKP-214ENST00000600573 DRAM2Q6UX65 266 aa17.57■□□□□ 0.4
PNKP-214ENST00000600573 CMTM4Q8IZR5 234 aa17.57■□□□□ 0.4
PNKP-214ENST00000600573 CADM3Q8N126 398 aa17.57■□□□□ 0.4
PNKP-214ENST00000600573 OR1F12Q8NHA8 337 aa17.57■□□□□ 0.4
PNKP-214ENST00000600573 ABHD17AQ96GS6 310 aa17.57■□□□□ 0.4
PNKP-214ENST00000600573 ABCG5Q9H222 651 aa17.57■□□□□ 0.4
PNKP-214ENST00000600573 A0A0U1RQV5 110 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 PLA2G10O15496 165 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 HNRNPCP07910 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
PNKP-214ENST00000600573 GABRA1P14867 456 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 CCL1P22362 96 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 OR3A2P47893 321 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 ID4P47928 161 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 CLDN12P56749 244 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 ARF1P84077 181 aaKnown RBP17.56■□□□□ 0.4
PNKP-214ENST00000600573 RAB11BQ15907 218 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 PLEKHN1Q494U1 663 aaPredicted RBP17.56■□□□□ 0.4
PNKP-214ENST00000600573 GLT8D1Q68CQ7 371 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 NUFIP2Q7Z417 695 aaKnown RBP17.56■□□□□ 0.4
PNKP-214ENST00000600573 UBE2J2Q8N2K1 259 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 OR52H1Q8NGJ2 320 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 ENKURQ8TC29 256 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 TRIM63Q969Q1 353 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 GPR137Q96N19 417 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 TRIB1Q96RU8 372 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 ZNF275Q9NSD4 429 aaPredicted RBP17.56■□□□□ 0.4
PNKP-214ENST00000600573 LHX6Q9UPM6 363 aa17.56■□□□□ 0.4
PNKP-214ENST00000600573 OR6C6A6NF89 314 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 A6NIN4 97 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 SLC17A2O00624 439 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 CTDSPLO15194 276 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 SYNGR3O43761 229 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 MPGP29372 298 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 ZNF57Q68EA5 555 aaPredicted RBP17.55■□□□□ 0.4
PNKP-214ENST00000600573 ASPHD2Q6ICH7 369 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 DOK3Q7L591 496 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 PRSS45Q7RTY3 260 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 SERPINA12Q8IW75 414 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 SKA3Q8IX90 412 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 NKAIN3Q8N8D7 197 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 DTX3Q8N9I9 347 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 PGAM5Q96HS1 289 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 ABHD1Q96SE0 405 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 OR2H1Q9GZK4 316 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 SLC17A5Q9NRA2 495 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 ASPMQ8IZT6 3477 aa17.55■□□□□ 0.4
PNKP-214ENST00000600573 M0R135 149 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 EEF1E1O43324 174 aaKnown RBP17.54■□□□□ 0.4
PNKP-214ENST00000600573 LYRM1O43325 122 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 DOK2O60496 412 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 HOXD4P09016 255 aaPredicted RBP17.54■□□□□ 0.4
PNKP-214ENST00000600573 COX5BP10606 129 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 ZNF32P17041 273 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 MMP15P51511 669 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 ART1P52961 327 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 GALK2Q01415 458 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 KRTAP27-1Q3LI81 207 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 NSUN5P2Q63ZY6 315 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 FAM180AQ6UWF9 173 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 FAM214BQ7L5A3 538 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 CELF2-AS1Q8N7Q2 184 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 SYNPRQ8TBG9 265 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 FOXRED1Q96CU9 486 aaPredicted RBP17.54■□□□□ 0.4
PNKP-214ENST00000600573 ZNF799Q96GE5 643 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 ZC3HAV1LQ96H79 300 aaKnown RBP17.54■□□□□ 0.4
PNKP-214ENST00000600573 NEDD4LQ96PU5 975 aa17.54■□□□□ 0.4
PNKP-214ENST00000600573 THAP7Q9BT49 309 aaPredicted RBP17.54■□□□□ 0.4
PNKP-214ENST00000600573 ZNF391Q9UJN7 358 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms