RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 MAD2L1BPQ15013 274 aaPredicted RBP11.14□□□□□ -0.63
SRRM1-223ENST00000600523 TIGD6Q17RP2 521 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 ALKBH6Q3KRA9 238 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 KRTAP27-1Q3LI81 207 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 SLC25A30Q5SVS4 291 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 LPCAT4Q643R3 524 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 DEGS2Q6QHC5 323 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 FBXW12Q6X9E4 464 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 SLC35F2Q8IXU6 374 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 SETD9Q8NE22 299 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 WFDC11Q8NEX6 87 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 OR51G2Q8NGK0 314 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 SPRYD4Q8WW59 207 aaPredicted RBP11.14□□□□□ -0.63
SRRM1-223ENST00000600523 CYGBQ8WWM9 190 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 FAM168AQ92567 244 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 HAVCR1Q96D42 359 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 MBOAT4Q96T53 435 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 PIMREGQ9BSJ6 248 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 OR10A2Q9H208 303 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 TPK1Q9H3S4 243 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 MYEF2Q9P2K5 600 aaKnown RBP11.14□□□□□ -0.63
SRRM1-223ENST00000600523 PURGQ9UJV8 347 aaKnown RBP11.14□□□□□ -0.63
SRRM1-223ENST00000600523 IKZF2Q9UKS7 526 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 PCDHGB1Q9Y5G3 927 aa11.14□□□□□ -0.63
SRRM1-223ENST00000600523 LOC390937A0A1W2PQ73 354 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 NDUFS8O00217 210 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 CASQ2O14958 399 aaPredicted RBP11.13□□□□□ -0.63
SRRM1-223ENST00000600523 SLC16A6O15403 523 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 NDUFS7O75251 213 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 SBK2P0C263 348 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 OR2T7P0C7T2 308 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 CD99P14209 185 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 DAOP14920 347 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 KITLGP21583 273 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 MPV17P39210 176 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 OPRL1P41146 370 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 MTNR1AP48039 350 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 RIDAP52758 137 aaKnown RBP11.13□□□□□ -0.63
SRRM1-223ENST00000600523 ACTC1P68032 377 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 ACTA1P68133 377 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 EGR3Q06889 387 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 PSG7Q13046 419 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 SNCBQ16143 134 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 OCLNQ16625 522 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 ZNF829Q3KNS6 432 aaPredicted RBP11.13□□□□□ -0.63
SRRM1-223ENST00000600523 OGFRL1Q5TC84 451 aaPredicted RBP11.13□□□□□ -0.63
SRRM1-223ENST00000600523 COLCA1Q6ZS62 124 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 BCDIN3DQ7Z5W3 292 aaKnown RBP11.13□□□□□ -0.63
SRRM1-223ENST00000600523 FTMTQ8N4E7 242 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 DHRSXQ8N5I4 330 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 OR10H4Q8NGA5 316 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 OR10S1Q8NGN2 331 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 OR13G1Q8NGZ3 307 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 OR2T27Q8NH04 317 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 UBASH3BQ8TF42 649 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 PGAM5Q96HS1 289 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 SLC22A4Q9H015 551 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 RGCCQ9H4X1 137 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 ADGRL4Q9HBW9 690 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 NKIRAS2Q9NYR9 191 aa11.13□□□□□ -0.63
SRRM1-223ENST00000600523 GGT3PA6NGU5 568 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 ACOD1A6NK06 481 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 SPRY3O43610 288 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 KRT8P05787 483 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 SLC25A16P16260 332 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 TNFRSF1AP19438 455 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 ZNF121P58317 390 aaPredicted RBP11.12□□□□□ -0.63
SRRM1-223ENST00000600523 PSMA6P60900 246 aaKnown RBP11.12□□□□□ -0.63
SRRM1-223ENST00000600523 CXCR4P61073 352 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 IL5RAQ01344 420 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 IL18R1Q13478 541 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 HLXQ14774 488 aaPredicted RBP11.12□□□□□ -0.63
SRRM1-223ENST00000600523 MSMPQ1L6U9 139 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 RSPO1Q2MKA7 263 aaPredicted RBP11.12□□□□□ -0.63
SRRM1-223ENST00000600523 ZNF322Q6U7Q0 402 aaPredicted RBP11.12□□□□□ -0.63
SRRM1-223ENST00000600523 LRRN1Q6UXK5 716 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 USP51Q70EK9 711 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 FAM220AQ7Z4H9 259 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 ZNF679Q8IYX0 411 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 ZCCHC24Q8N2G6 241 aaKnown RBP11.12□□□□□ -0.63
SRRM1-223ENST00000600523 SAP30LQ9HAJ7 183 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 RNPEPL1Q9HAU8 725 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 BRD7Q9NPI1 651 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 ZNF391Q9UJN7 358 aa11.12□□□□□ -0.63
SRRM1-223ENST00000600523 MYO9AB2RTY4 2548 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 ARID1AO14497 2285 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 USF3Q68DE3 2245 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 TMEM269A0A1B0GVZ9 245 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 IRGMA1A4Y4 181 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 ENTPD6O75354 484 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 SLC2A1P11166 492 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 PSKH1P11801 424 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 FOSL1P15407 271 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 DCTDP32321 178 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 DDOSTP39656 456 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 HCCSP53701 268 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 CCL8P80075 99 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 MRPS11P82912 194 aaKnown RBP11.11□□□□□ -0.63
SRRM1-223ENST00000600523 ROM1Q03395 351 aa11.11□□□□□ -0.63
SRRM1-223ENST00000600523 MZT1Q08AG7 82 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms