RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PROKR2Q8NFJ6 384 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 OR10AD1Q8NGE0 317 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 OR9Q2Q8NGE9 314 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 CCT8L2Q96SF2 557 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 SLC22A4Q9H015 551 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 FN3KQ9H479 309 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 NTN4Q9HB63 628 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 TMEM165Q9HC07 324 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 DDX28Q9NUL7 540 aaKnown RBP13.28□□□□□ -0.28
VRK3-221ENST00000600284 LRCH1Q9Y2L9 728 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 NOP16Q9Y3C1 178 aaKnown RBP13.28□□□□□ -0.28
VRK3-221ENST00000600284 WNK2Q9Y3S1 2297 aa13.28□□□□□ -0.28
VRK3-221ENST00000600284 H0YL77 283 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 TRAPPC2LH3BP13 241 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 M0R135 149 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 HAX1O00165 279 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 WNT2P09544 360 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 CALB2P22676 271 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 OTX1P32242 354 aaPredicted RBP13.27□□□□□ -0.29
VRK3-221ENST00000600284 ZNF154Q13106 437 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 MICAQ29983 383 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 FAM98BQ52LJ0 330 aaKnown RBP13.27□□□□□ -0.29
VRK3-221ENST00000600284 C12orf54Q6X4T0 127 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 PGAP1Q75T13 922 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 BPIFB2Q8N4F0 458 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 BHLHE23Q8NDY6 225 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 DEFB108BQ8NET1 73 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 ZNF420Q8TAQ5 688 aaPredicted RBP13.27□□□□□ -0.29
VRK3-221ENST00000600284 SLCO4A1Q96BD0 722 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 ZNF799Q96GE5 643 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 MAP6Q96JE9 813 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 RBM4Q9BWF3 364 aaKnown RBP13.27□□□□□ -0.29
VRK3-221ENST00000600284 DGCR6LQ9BY27 220 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 PLA2G12AQ9BZM1 189 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 WDR76Q9H967 626 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 MMP26Q9NRE1 261 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 MIOXQ9UGB7 285 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 INSIG2Q9Y5U4 225 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 AUP1Q9Y679 476 aa13.27□□□□□ -0.29
VRK3-221ENST00000600284 CEACAM18A8MTB9 384 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 F5H5P2 479 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 FMO3P31513 532 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 PYCR1P32322 319 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 CD200P41217 278 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 COMPP49747 757 aaPredicted RBP13.26□□□□□ -0.29
VRK3-221ENST00000600284 BLVRAP53004 296 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 SLC25A1P53007 311 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 DBPQ10586 325 aaPredicted RBP13.26□□□□□ -0.29
VRK3-221ENST00000600284 HNRNPA0Q13151 305 aaKnown RBP13.26□□□□□ -0.29
VRK3-221ENST00000600284 PCK2Q16822 640 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 TEX30Q5JUR7 227 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 OR2T5Q6IEZ7 315 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 DRAM2Q6UX65 266 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 NAA40Q86UY6 237 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 CYB561A3Q8NBI2 242 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 AQP11Q8NBQ7 271 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 SLC37A3Q8NCC5 494 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 OR2T33Q8NG76 320 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 OR8D4Q8NGM9 314 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 OR10S1Q8NGN2 331 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 OR2T29Q8NH02 315 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 Q8TCH9 128 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 SPRYD4Q8WW59 207 aaPredicted RBP13.26□□□□□ -0.29
VRK3-221ENST00000600284 DVL3Q92997 716 aaPredicted RBP13.26□□□□□ -0.29
VRK3-221ENST00000600284 TSSK6Q9BXA6 273 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 NMNAT2Q9BZQ4 307 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 REEP1Q9H902 201 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 TBC1D23Q9NUY8 699 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 OR5V1Q9UGF6 321 aa13.26□□□□□ -0.29
VRK3-221ENST00000600284 GMDSO60547 372 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 FAM107AO95990 144 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 CYB5R3P00387 301 aaPredicted RBP13.25□□□□□ -0.29
VRK3-221ENST00000600284 PPIAL4GP0DN37 164 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 IRF2P14316 349 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 RBMXP38159 391 aaKnown RBP13.25□□□□□ -0.29
VRK3-221ENST00000600284 SEC61A1P61619 476 aaKnown RBP13.25□□□□□ -0.29
VRK3-221ENST00000600284 MS4A2Q01362 244 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 MAB21L1Q13394 359 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 TUSC1Q2TAM9 212 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 CD300LDQ6UXZ3 194 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 MRPL21Q7Z2W9 205 aaKnown RBP13.25□□□□□ -0.29
VRK3-221ENST00000600284 MOGAT3Q86VF5 341 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 PLPP7Q8NBV4 271 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 ZNRF4Q8WWF5 429 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 ASB9Q96DX5 294 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 PLEKHA8Q96JA3 519 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 SLC6A7Q99884 636 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 MRI1Q9BV20 369 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 SSBP3Q9BWW4 388 aaPredicted RBP13.25□□□□□ -0.29
VRK3-221ENST00000600284 C1orf21Q9H246 121 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 NUP50Q9UKX7 468 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 PRPF19Q9UMS4 504 aaKnown RBP13.25□□□□□ -0.29
VRK3-221ENST00000600284 SAMHD1Q9Y3Z3 626 aaKnown RBP13.25□□□□□ -0.29
VRK3-221ENST00000600284 PPIAL4AQ9Y536 164 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 COMMD3-BMI1R4GMX3 469 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 ARHGAP32A7KAX9 2087 aa13.25□□□□□ -0.29
VRK3-221ENST00000600284 TMEM89A2RUT3 159 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 TVP23AA6NH52 213 aa13.24□□□□□ -0.29
VRK3-221ENST00000600284 RGS9O75916 674 aaPredicted RBP13.24□□□□□ -0.29
VRK3-221ENST00000600284 IFNGP01579 166 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms