RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 CYLC2Q14093 348 aaPredicted RBP5.03□□□□□ -1.6
VRK3-220ENST00000600259 GK2Q14410 553 aaPredicted RBP5.03□□□□□ -1.6
VRK3-220ENST00000600259 MEP1BQ16820 701 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 C11orf91Q3C1V1 193 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 ZBED5Q49AG3 693 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 TTMPQ5BVD1 217 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 BEND6Q5SZJ8 279 aaPredicted RBP5.03□□□□□ -1.6
VRK3-220ENST00000600259 AGBL2Q5U5Z8 902 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 PRAMEF6Q5VXH4 476 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 CD276Q5ZPR3 534 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 PTCHD4Q6ZW05 846 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 MBOAT2Q6ZWT7 520 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 GLB1L2Q8IW92 636 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 OFCC1Q8IZS5 231 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 FGFRL1Q8N441 504 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 LY6G5BQ8NDX9 201 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 BHLHE23Q8NDY6 225 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 OR8J3Q8NGG0 315 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 OR5L1Q8NGL2 311 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 ACOT11Q8WXI4 607 aaPredicted RBP5.03□□□□□ -1.6
VRK3-220ENST00000600259 GATAD2BQ8WXI9 593 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 LHX4Q969G2 390 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 UBE2FQ969M7 185 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 TSSK2Q96PF2 358 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 COQ7Q99807 217 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 ECSITQ9BQ95 431 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 TRIM15Q9C019 465 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 NUAK2Q9H093 628 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 SYT4Q9H2B2 425 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 PNRC2Q9NPJ4 139 aaKnown RBP5.03□□□□□ -1.6
VRK3-220ENST00000600259 NRIP3Q9NQ35 241 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 UFSP2Q9NUQ7 469 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 GMPR2Q9P2T1 348 aaKnown RBP5.03□□□□□ -1.6
VRK3-220ENST00000600259 RHCGQ9UBD6 479 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 RNF7Q9UBF6 113 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 KAAG1Q9UBP8 84 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 GRHPRQ9UBQ7 328 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 SIGLEC7Q9Y286 467 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 IGLV1-36A0A0B4J1U3 117 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 CD300LBA8K4G0 201 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 ADAM20O43506 726 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 NDUFA2O43678 99 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 RRP9O43818 475 aaKnown RBP5.02□□□□□ -1.61
VRK3-220ENST00000600259 ALX3O95076 343 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 NPPAP01160 153 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 IFNA14P01570 189 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 PRB2P02812 416 aaPredicted RBP5.02□□□□□ -1.61
VRK3-220ENST00000600259 OPN1MWP04001 364 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 VIMP08670 466 aaKnown RBP5.02□□□□□ -1.61
VRK3-220ENST00000600259 OPN1MW2P0DN77 364 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 OPN1MW3P0DN78 364 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 SDHAP31040 664 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 GPR4P46093 362 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 KRR1Q13601 381 aaKnown RBP5.02□□□□□ -1.61
VRK3-220ENST00000600259 TRAM2Q15035 370 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 METTL21CQ5VZV1 264 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 GPR139Q6DWJ6 353 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 SFRP4Q6FHJ7 346 aaPredicted RBP5.02□□□□□ -1.61
VRK3-220ENST00000600259 SLC35E4Q6ICL7 350 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 ERICH5Q6P6B1 374 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 CORO6Q6QEF8 472 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 METAP1DQ6UB28 335 aaPredicted RBP5.02□□□□□ -1.61
VRK3-220ENST00000600259 CFAP77Q6ZQR2 320 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 ZNF826PQ6ZT77 177 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 BTN2A1Q7KYR7 527 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 VTCN1Q7Z7D3 282 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 FAM90A1Q86YD7 464 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 C11orf53Q8IXP5 236 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 OR6V1Q8N148 313 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 GCSAMQ8N6F7 178 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 Q8N7P7 452 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 PNLDC1Q8NA58 520 aaKnown RBP5.02□□□□□ -1.61
VRK3-220ENST00000600259 PLPP7Q8NBV4 271 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 GJC3Q8NFK1 279 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 SLC7A13Q8TCU3 470 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 CFHR4Q92496 578 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 TNFRSF14Q92956 283 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 SLCO4A1Q96BD0 722 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 AJUBAQ96IF1 538 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 GPX7Q96SL4 187 aaPredicted RBP5.02□□□□□ -1.61
VRK3-220ENST00000600259 HDHD2Q9H0R4 259 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 SEMA6AQ9H2E6 1030 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 CNTD2Q9H8S5 307 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 ERVK-18Q9QC07 812 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 FBLN5Q9UBX5 448 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 RPUSD1Q9UJJ7 312 aaKnown RBP5.02□□□□□ -1.61
VRK3-220ENST00000600259 B9D1Q9UPM9 204 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 RYR3Q15413 4870 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 COL7A1Q02388 2944 aa5.02□□□□□ -1.61
VRK3-220ENST00000600259 TRAV38-1A0A0B4J264 116 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 A0A1B0GW55 424 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 OOEPA6NGQ2 149 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 RNASEK-C17orf49H0YIS7 233 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.01□□□□□ -1.61
VRK3-220ENST00000600259 SOCS2O14508 198 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 XKRYO14609 159 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 DVL1O14640 695 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 OR10H3O60404 316 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 NDUFB2O95178 105 aa5.01□□□□□ -1.61
VRK3-220ENST00000600259 ECDO95905 644 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms