RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MAGEB4O15481 346 aaPredicted RBP16.21■□□□□ 0.19
CCDC9-205ENST00000600117 GPRIN2O60269 458 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 FAM20BO75063 409 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 FADS2O95864 444 aaKnown RBP16.21■□□□□ 0.19
CCDC9-205ENST00000600117 ABHD16AO95870 558 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 PIPP12273 146 aaPredicted RBP16.21■□□□□ 0.19
CCDC9-205ENST00000600117 ANOS1P23352 680 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 THBS4P35443 961 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 TPTEP56180 551 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 ERVS71-1P61550 626 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 TAF13Q15543 124 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 KRT77Q7Z794 578 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 ZNF679Q8IYX0 411 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 ACBD7Q8N6N7 88 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 TMEM171Q8WVE6 324 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 JAM3Q9BX67 310 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 C1QTNF5Q9BXJ0 243 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 OR51B6Q9H340 312 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 ZNF442Q9H7R0 627 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 ELOVL3Q9HB03 270 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 CISD1Q9NZ45 108 aaKnown RBP16.21■□□□□ 0.19
CCDC9-205ENST00000600117 CNOT2Q9NZN8 540 aaKnown RBP16.21■□□□□ 0.19
CCDC9-205ENST00000600117 EIF3KQ9UBQ5 218 aaKnown RBP16.21■□□□□ 0.19
CCDC9-205ENST00000600117 MRM2Q9UI43 246 aaKnown RBP16.21■□□□□ 0.19
CCDC9-205ENST00000600117 SPEF1Q9Y4P9 236 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 EFCAB10A6NFE3 127 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 ZNF254O75437 659 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 LY6G6DO95868 133 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 GLRXP35754 106 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 RGS6P49758 472 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 CSNK2BP67870 215 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 DRAM2Q6UX65 266 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 KRTAP1-3Q8IUG1 177 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 POFUT1Q9H488 388 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 NIPAL2Q9H841 368 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 CA10Q9NS85 328 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 IKZF2Q9UKS7 526 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 STARD10Q9Y365 291 aa16.2■□□□□ 0.18
CCDC9-205ENST00000600117 ANK3Q12955 4377 aaKnown RBP16.2■□□□□ 0.18
CCDC9-205ENST00000600117 DAPL1A0PJW8 107 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 IRGMA1A4Y4 181 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 C5orf63A6NC05 138 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 CCDC159P0C7I6 412 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 DCKP27707 260 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 HSD11B1P28845 292 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 DCTDP32321 178 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 RAD52P43351 418 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 CX3CR1P49238 355 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 PPP1CBP62140 327 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 MVKQ03426 396 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 CDONQ4KMG0 1287 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 SHEQ5VZ18 495 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 VHLLQ6RSH7 139 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 ARL9Q6T311 187 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 PRSS45Q7RTY3 260 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.19■□□□□ 0.18
CCDC9-205ENST00000600117 ZNF283Q8N7M2 679 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 ZNF611Q8N823 705 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 OR1J1Q8NGS3 322 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 ABHD4Q8TB40 342 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 DOK1Q99704 481 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 DHRS9Q9BPW9 319 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 MROQ9BYG7 248 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 BCL2L14Q9BZR8 327 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 INPP5EQ9NRR6 644 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 ERVK13-1Q9NX77 482 aa16.19■□□□□ 0.18
CCDC9-205ENST00000600117 DIMT1Q9UNQ2 313 aaKnown RBP16.19■□□□□ 0.18
CCDC9-205ENST00000600117 METTL15A6NJ78 407 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 J3QW42 95 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 SRSF10O75494 262 aaKnown RBP16.18■□□□□ 0.18
CCDC9-205ENST00000600117 DANCRP0C864 163 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 LIMS3P0CW19 117 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 LIMS4P0CW20 117 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 SLC2A1P11166 492 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 RIDAP52758 137 aaKnown RBP16.18■□□□□ 0.18
CCDC9-205ENST00000600117 ZNF121P58317 390 aaPredicted RBP16.18■□□□□ 0.18
CCDC9-205ENST00000600117 PSMA6P60900 246 aaKnown RBP16.18■□□□□ 0.18
CCDC9-205ENST00000600117 ST3GAL4Q11206 333 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 GALEQ14376 348 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 ADIPOQQ15848 244 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 ZNF544Q6NX49 715 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 AHSA2Q719I0 299 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 LHFPL3Q86UP9 236 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 FBXW5Q969U6 566 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 APOBEC3DQ96AK3 386 aaPredicted RBP16.18■□□□□ 0.18
CCDC9-205ENST00000600117 MARS2Q96GW9 593 aaKnown RBP16.18■□□□□ 0.18
CCDC9-205ENST00000600117 TMEM80Q96HE8 168 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 UBTD1Q9HAC8 227 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 PAK1IP1Q9NWT1 392 aaPredicted RBP16.18■□□□□ 0.18
CCDC9-205ENST00000600117 LRRC42Q9Y546 428 aa16.18■□□□□ 0.18
CCDC9-205ENST00000600117 SULT1C4O75897 302 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 APOC1P02654 83 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 LCATP04180 440 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 KRT8P05787 483 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 LCKP06239 509 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 CRHBPP24387 322 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 APOBEC3AP31941 199 aaPredicted RBP16.17■□□□□ 0.18
CCDC9-205ENST00000600117 SLC6A9P48067 706 aa16.17■□□□□ 0.18
CCDC9-205ENST00000600117 RPS23P62266 143 aaKnown RBP16.17■□□□□ 0.18
CCDC9-205ENST00000600117 SNAI3Q3KNW1 292 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms