RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 ABCA1O95477 2261 aa23.96■■□□□ 1.43
SSBP4-206ENST00000599699 CHD3Q12873 2000 aaKnown RBP23.96■■□□□ 1.43
SSBP4-206ENST00000599699 LRP5LA4QPB2 252 aa23.96■■□□□ 1.43
SSBP4-206ENST00000599699 SELENOFO60613 162 aa23.96■■□□□ 1.43
SSBP4-206ENST00000599699 IGHV4-31P0DP07 118 aa23.96■■□□□ 1.43
SSBP4-206ENST00000599699 CRYBB2P43320 205 aa23.96■■□□□ 1.43
SSBP4-206ENST00000599699 CDK5R2Q13319 367 aa23.96■■□□□ 1.43
SSBP4-206ENST00000599699 APOFQ13790 326 aa23.96■■□□□ 1.43
SSBP4-206ENST00000599699 TRIP10Q15642 601 aa23.96■■□□□ 1.43
SSBP4-206ENST00000599699 HFEQ30201 348 aa23.96■■□□□ 1.43
SSBP4-206ENST00000599699 DRAM2Q6UX65 266 aa23.96■■□□□ 1.43
SSBP4-206ENST00000599699 ZNF582Q96NG8 517 aaPredicted RBP23.96■■□□□ 1.43
SSBP4-206ENST00000599699 KCNJ15Q99712 375 aa23.96■■□□□ 1.43
SSBP4-206ENST00000599699 ABHD6Q9BV23 337 aa23.96■■□□□ 1.43
SSBP4-206ENST00000599699 TLX2O43763 284 aaPredicted RBP23.95■■□□□ 1.42
SSBP4-206ENST00000599699 RP2O75695 350 aa23.95■■□□□ 1.42
SSBP4-206ENST00000599699 ADH4P08319 380 aa23.95■■□□□ 1.42
SSBP4-206ENST00000599699 HSD11B1P28845 292 aa23.95■■□□□ 1.42
SSBP4-206ENST00000599699 EPHA2P29317 976 aa23.95■■□□□ 1.42
SSBP4-206ENST00000599699 NAA10P41227 235 aaPredicted RBP23.95■■□□□ 1.42
SSBP4-206ENST00000599699 GZMKP49863 264 aa23.95■■□□□ 1.42
SSBP4-206ENST00000599699 GRB2P62993 217 aaKnown RBP23.95■■□□□ 1.42
SSBP4-206ENST00000599699 Q6ZR03 302 aa23.95■■□□□ 1.42
SSBP4-206ENST00000599699 ZNF283Q8N7M2 679 aa23.95■■□□□ 1.42
SSBP4-206ENST00000599699 TREM2Q9NZC2 230 aa23.95■■□□□ 1.42
SSBP4-206ENST00000599699 TMEFF2Q9UIK5 374 aaPredicted RBP23.95■■□□□ 1.42
SSBP4-206ENST00000599699 ZAR1LA6NP61 321 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 H3BNX3 289 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 PRKYO43930 277 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 LILRA1O75019 489 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 TACSTD2P09758 323 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 SELEP16581 610 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 OTX1P32242 354 aaPredicted RBP23.94■■□□□ 1.42
SSBP4-206ENST00000599699 GK2Q14410 553 aaPredicted RBP23.94■■□□□ 1.42
SSBP4-206ENST00000599699 SLX4IPQ5VYV7 408 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 PGAP1Q75T13 922 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 MRPL21Q7Z2W9 205 aaKnown RBP23.94■■□□□ 1.42
SSBP4-206ENST00000599699 BHLHE23Q8NDY6 225 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 THEM6Q8WUY1 208 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 CCL17Q92583 94 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 RBM4BQ9BQ04 359 aaKnown RBP23.94■■□□□ 1.42
SSBP4-206ENST00000599699 RIBC2Q9H4K1 309 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 NARFLQ9H6Q4 476 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 CACNG2Q9Y698 323 aa23.94■■□□□ 1.42
SSBP4-206ENST00000599699 M0R129 80 aa23.93■■□□□ 1.42
SSBP4-206ENST00000599699 CD55P08174 381 aa23.93■■□□□ 1.42
SSBP4-206ENST00000599699 SLC2A1P11166 492 aa23.93■■□□□ 1.42
SSBP4-206ENST00000599699 SLC2A5P22732 501 aa23.93■■□□□ 1.42
SSBP4-206ENST00000599699 PRSS12P56730 875 aa23.93■■□□□ 1.42
SSBP4-206ENST00000599699 SNAI3Q3KNW1 292 aa23.93■■□□□ 1.42
SSBP4-206ENST00000599699 LCN1P1Q5VSP4 162 aa23.93■■□□□ 1.42
SSBP4-206ENST00000599699 TCEANCQ8N8B7 351 aa23.93■■□□□ 1.42
SSBP4-206ENST00000599699 ZNF454Q8N9F8 522 aa23.93■■□□□ 1.42
SSBP4-206ENST00000599699 OR8G5Q8NG78 346 aa23.93■■□□□ 1.42
SSBP4-206ENST00000599699 RNF133Q8WVZ7 376 aa23.93■■□□□ 1.42
SSBP4-206ENST00000599699 H2AFY2Q9P0M6 372 aaPredicted RBP23.93■■□□□ 1.42
SSBP4-206ENST00000599699 CLDN25C9JDP6 229 aa23.92■■□□□ 1.42
SSBP4-206ENST00000599699 LYNP07948 512 aa23.92■■□□□ 1.42
SSBP4-206ENST00000599699 H2BFMP0C1H6 154 aa23.92■■□□□ 1.42
SSBP4-206ENST00000599699 ZNF16P17020 682 aaPredicted RBP23.92■■□□□ 1.42
SSBP4-206ENST00000599699 CX3CR1P49238 355 aa23.92■■□□□ 1.42
SSBP4-206ENST00000599699 C6orf52Q5T4I8 152 aa23.92■■□□□ 1.42
SSBP4-206ENST00000599699 OR13G1Q8NGZ3 307 aa23.92■■□□□ 1.42
SSBP4-206ENST00000599699 OTOSQ8NHW6 89 aa23.92■■□□□ 1.42
SSBP4-206ENST00000599699 AMELYQ99218 206 aa23.92■■□□□ 1.42
SSBP4-206ENST00000599699 OSBPL10Q9BXB5 764 aa23.92■■□□□ 1.42
SSBP4-206ENST00000599699 TOR3AQ9H497 397 aa23.92■■□□□ 1.42
SSBP4-206ENST00000599699 A8MV72 311 aaPredicted RBP23.91■■□□□ 1.42
SSBP4-206ENST00000599699 ANXA2P07355 339 aaKnown RBP23.91■■□□□ 1.42
SSBP4-206ENST00000599699 MVKQ03426 396 aa23.91■■□□□ 1.42
SSBP4-206ENST00000599699 SPRNQ5BIV9 151 aa23.91■■□□□ 1.42
SSBP4-206ENST00000599699 AVPI1Q5T686 147 aa23.91■■□□□ 1.42
SSBP4-206ENST00000599699 C12orf73Q69YU5 71 aa23.91■■□□□ 1.42
SSBP4-206ENST00000599699 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.91■■□□□ 1.42
SSBP4-206ENST00000599699 SPRYD4Q8WW59 207 aaPredicted RBP23.91■■□□□ 1.42
SSBP4-206ENST00000599699 IL4I1Q96RQ9 567 aa23.91■■□□□ 1.42
SSBP4-206ENST00000599699 TEAD3Q99594 435 aa23.91■■□□□ 1.42
SSBP4-206ENST00000599699 DNAJC27Q9NZQ0 273 aa23.91■■□□□ 1.42
SSBP4-206ENST00000599699 ORC6Q9Y5N6 252 aa23.91■■□□□ 1.42
SSBP4-206ENST00000599699 FN1P02751 2386 aaKnown RBP23.91■■□□□ 1.42
SSBP4-206ENST00000599699 LOC100289279A0A1B0GTE1 492 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 IQCF6A8MYZ5 107 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 TBX1O43435 398 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 APOC1P02654 83 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 MRPL3P09001 348 aaKnown RBP23.9■■□□□ 1.42
SSBP4-206ENST00000599699 HOXB4P17483 251 aaPredicted RBP23.9■■□□□ 1.42
SSBP4-206ENST00000599699 TNFRSF1AP19438 455 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 IL2RGP31785 369 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 POLR2IP36954 125 aaKnown RBP23.9■■□□□ 1.42
SSBP4-206ENST00000599699 GLYATL3Q5SZD4 288 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 BCDIN3DQ7Z5W3 292 aaKnown RBP23.9■■□□□ 1.42
SSBP4-206ENST00000599699 OR10AD1Q8NGE0 317 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 OR2AE1Q8NHA4 323 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 TMEM163Q8TC26 289 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 HPS1Q92902 700 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 MSI2Q96DH6 328 aaKnown RBP23.9■■□□□ 1.42
SSBP4-206ENST00000599699 TIMD4Q96H15 378 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 TMEM100Q9NV29 134 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 LAMP5Q9UJQ1 280 aa23.9■■□□□ 1.42
SSBP4-206ENST00000599699 OPRL1P41146 370 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms