RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CENPAP49450 140 aa17.6■□□□□ 0.41
PNKP-212ENST00000599454 RAD23AP54725 363 aa17.6■□□□□ 0.41
PNKP-212ENST00000599454 MALLQ13021 153 aa17.6■□□□□ 0.41
PNKP-212ENST00000599454 GK2Q14410 553 aaPredicted RBP17.6■□□□□ 0.41
PNKP-212ENST00000599454 LYPD2Q6UXB3 125 aa17.6■□□□□ 0.41
PNKP-212ENST00000599454 CITED1Q99966 193 aa17.6■□□□□ 0.41
PNKP-212ENST00000599454 SLC22A4Q9H015 551 aa17.6■□□□□ 0.41
PNKP-212ENST00000599454 WDR76Q9H967 626 aa17.6■□□□□ 0.41
PNKP-212ENST00000599454 MARCH7Q9H992 704 aa17.6■□□□□ 0.41
PNKP-212ENST00000599454 C1RLQ9NZP8 487 aa17.6■□□□□ 0.41
PNKP-212ENST00000599454 FAM32AQ9Y421 112 aaKnown RBP17.6■□□□□ 0.41
PNKP-212ENST00000599454 A0A0G2JK05 382 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 ZNF879B4DU55 563 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 C22orf46C9J442 243 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 M0QZ24 198 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 TNFRSF13BO14836 293 aaPredicted RBP17.59■□□□□ 0.41
PNKP-212ENST00000599454 TIMM23O14925 209 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 FAM20BO75063 409 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 ACSM4P0C7M7 580 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 CFHR2P36980 270 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 FXYD6P3P58550 94 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 PDCD1Q15116 288 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 MEP1BQ16820 701 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 RSPO1Q2MKA7 263 aaPredicted RBP17.59■□□□□ 0.41
PNKP-212ENST00000599454 SLC36A3Q495N2 470 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 CLEC12AQ5QGZ9 265 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 CORO6Q6QEF8 472 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.59■□□□□ 0.41
PNKP-212ENST00000599454 RP9Q8TA86 221 aaKnown RBP17.59■□□□□ 0.41
PNKP-212ENST00000599454 HOPXQ9BPY8 73 aaPredicted RBP17.59■□□□□ 0.41
PNKP-212ENST00000599454 PCGF1Q9BSM1 259 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 CHIAQ9BZP6 476 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 TRIM36Q9NQ86 728 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 GMPR2Q9P2T1 348 aaKnown RBP17.59■□□□□ 0.41
PNKP-212ENST00000599454 ERVK-18Q9QC07 812 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 TMCC3Q9ULS5 477 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 B9D1Q9UPM9 204 aa17.59■□□□□ 0.41
PNKP-212ENST00000599454 IGLV1-36A0A0B4J1U3 117 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 UNC119BA6NIH7 251 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 DCTN6O00399 190 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 NDUFAB1O14561 156 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 MELTFP08582 738 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 RHCEP18577 417 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 MDH1P40925 334 aaKnown RBP17.58■□□□□ 0.4
PNKP-212ENST00000599454 FGD3Q5JSP0 725 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 SLC18B1Q6NT16 456 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 BRICD5Q6PL45 260 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 SMARCD3Q6STE5 483 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 ZNF620Q6ZNG0 422 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 TSEN54Q7Z6J9 526 aaKnown RBP17.58■□□□□ 0.4
PNKP-212ENST00000599454 SLC26A10Q8NG04 563 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 SSMEM1Q8WWF3 244 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 GATAD2BQ8WXI9 593 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 TSSK2Q96PF2 358 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 TECTBQ96PL2 329 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 PITX2Q99697 317 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 ATF6BQ99941 703 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 MMP27Q9H306 513 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 FN3KRPQ9HA64 309 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 FGFR1OP2Q9NVK5 253 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 PDP1Q9P0J1 537 aaPredicted RBP17.58■□□□□ 0.4
PNKP-212ENST00000599454 RNF7Q9UBF6 113 aa17.58■□□□□ 0.4
PNKP-212ENST00000599454 CMYA5Q8N3K9 4069 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 F5H5K5 113 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 LGALS8O00214 317 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 NDUFA2O43678 99 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 TOX4O94842 621 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 PPP1R3DO95685 299 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 RENP00797 406 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 SLC7A2P52569 658 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 RELBQ01201 579 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 SRSF4Q08170 494 aaKnown RBP17.57■□□□□ 0.4
PNKP-212ENST00000599454 RUSC1-AS1Q66K80 236 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 PGAP1Q75T13 922 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 OR6V1Q8N148 313 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 PNLDC1Q8NA58 520 aaKnown RBP17.57■□□□□ 0.4
PNKP-212ENST00000599454 PLPP7Q8NBV4 271 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 TBC1D15Q8TC07 691 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 SPRYD4Q8WW59 207 aaPredicted RBP17.57■□□□□ 0.4
PNKP-212ENST00000599454 DYRK2Q92630 601 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 FAM162AQ96A26 154 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 ERMAPQ96PL5 475 aaPredicted RBP17.57■□□□□ 0.4
PNKP-212ENST00000599454 CCT8L2Q96SF2 557 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 TRIM15Q9C019 465 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 MMADHCQ9H3L0 296 aaPredicted RBP17.57■□□□□ 0.4
PNKP-212ENST00000599454 TNFRSF19Q9NS68 423 aa17.57■□□□□ 0.4
PNKP-212ENST00000599454 NME4O00746 187 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 ARPC3O15145 178 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 PTBP3O95758 552 aaKnown RBP17.56■□□□□ 0.4
PNKP-212ENST00000599454 LCATP04180 440 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 SFTPBP07988 381 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 MMP9P14780 707 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 GSK3BP49841 420 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 TRAP1Q12931 704 aaKnown RBP17.56■□□□□ 0.4
PNKP-212ENST00000599454 OR8G1Q15617 311 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 C11orf91Q3C1V1 193 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 METTL11BQ5VVY1 283 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 PRAMEF6Q5VXH4 476 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 CFAP77Q6ZQR2 320 aa17.56■□□□□ 0.4
PNKP-212ENST00000599454 MRPL21Q7Z2W9 205 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms