RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 USP51Q70EK9 711 aa11.78□□□□□ -0.52
UPF1-205ENST00000598209 OR5AS1Q8N127 324 aa11.78□□□□□ -0.52
UPF1-205ENST00000598209 GABARAPL3Q9BY60 117 aa11.78□□□□□ -0.52
UPF1-205ENST00000598209 RIBC2Q9H4K1 309 aa11.78□□□□□ -0.52
UPF1-205ENST00000598209 S100A14Q9HCY8 104 aa11.78□□□□□ -0.52
UPF1-205ENST00000598209 ZNF275Q9NSD4 429 aaPredicted RBP11.78□□□□□ -0.52
UPF1-205ENST00000598209 MALRD1Q5VYJ5 2156 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 IGHV1-69-2A0A0G2JMI3 117 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 CCDC182A6NF36 153 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 TLX2O43763 284 aaPredicted RBP11.77□□□□□ -0.53
UPF1-205ENST00000598209 CD5LO43866 347 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 LILRA1O75019 489 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 TACSTD2P09758 323 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 POLR2IP36954 125 aaKnown RBP11.77□□□□□ -0.53
UPF1-205ENST00000598209 CRYBB2P43320 205 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 SLC15A1P46059 708 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 GPR6P46095 362 aaPredicted RBP11.77□□□□□ -0.53
UPF1-205ENST00000598209 PRSS12P56730 875 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 RIPPLY3P57055 190 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 GRB2P62993 217 aaKnown RBP11.77□□□□□ -0.53
UPF1-205ENST00000598209 MALLQ13021 153 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 GK2Q14410 553 aaPredicted RBP11.77□□□□□ -0.53
UPF1-205ENST00000598209 TRIP10Q15642 601 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 SNAI3Q3KNW1 292 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 ZNF283Q8N7M2 679 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 TCEANCQ8N8B7 351 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 OR2Z1Q8NG97 314 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 OTOSQ8NHW6 89 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 RNF133Q8WVZ7 376 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 ELMOD3Q96FG2 381 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 AMELYQ99218 206 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 TEAD3Q99594 435 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 EGLN1Q9GZT9 426 aa11.77□□□□□ -0.53
UPF1-205ENST00000598209 C2CD3Q4AC94 2353 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 HIVEP2P31629 2446 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 LRP5LA4QPB2 252 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 C5orf63A6NC05 138 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 IQCF6A8MYZ5 107 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 EI24O14681 340 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 PPIHO43447 177 aaKnown RBP11.76□□□□□ -0.53
UPF1-205ENST00000598209 LYNP07948 512 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 CD55P08174 381 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 IGHV4-31P0DP07 118 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 SLC2A1P11166 492 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 SELEP16581 610 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 ANOS1P23352 680 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 TNFSF4P23510 183 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 HSD11B1P28845 292 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 CX3CR1P49238 355 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 CHN2P52757 468 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 TMEM33P57088 247 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 TNFAIP6P98066 277 aaPredicted RBP11.76□□□□□ -0.53
UPF1-205ENST00000598209 EFNB1P98172 346 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 SPRNQ5BIV9 151 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 LCN1P1Q5VSP4 162 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 PGAP1Q75T13 922 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 SLC16A9Q7RTY1 509 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 MRPL21Q7Z2W9 205 aaKnown RBP11.76□□□□□ -0.53
UPF1-205ENST00000598209 BCDIN3DQ7Z5W3 292 aaKnown RBP11.76□□□□□ -0.53
UPF1-205ENST00000598209 ZNF454Q8N9F8 522 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 OR8G5Q8NG78 346 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 TMEM163Q8TC26 289 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 THEM6Q8WUY1 208 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 ZNF582Q96NG8 517 aaPredicted RBP11.76□□□□□ -0.53
UPF1-205ENST00000598209 IL4I1Q96RQ9 567 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 TOR3AQ9H497 397 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 USE1Q9NZ43 259 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 H2AFY2Q9P0M6 372 aaPredicted RBP11.76□□□□□ -0.53
UPF1-205ENST00000598209 KLHDC2Q9Y2U9 406 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 N6AMT1Q9Y5N5 214 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 CACNG2Q9Y698 323 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 ABCA2Q9BZC7 2435 aa11.76□□□□□ -0.53
UPF1-205ENST00000598209 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.75□□□□□ -0.532e-10■■■■□ 22.9
UPF1-205ENST00000598209 FN1P02751 2386 aaKnown RBP11.75□□□□□ -0.53
UPF1-205ENST00000598209 ALPLP05186 524 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 ANXA2P07355 339 aaKnown RBP11.75□□□□□ -0.53
UPF1-205ENST00000598209 MRPL3P09001 348 aaKnown RBP11.75□□□□□ -0.53
UPF1-205ENST00000598209 H2BFMP0C1H6 154 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 OPRL1P41146 370 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 ZNF92Q03936 586 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 HFEQ30201 348 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 GLYATL3Q5SZD4 288 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 AADACL4Q5VUY2 407 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 NXNL2Q5VZ03 156 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 CYB5R2Q6BCY4 276 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 RHOUQ7L0Q8 258 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 PQLC1Q8N2U9 271 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 BHLHE23Q8NDY6 225 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 OR13G1Q8NGZ3 307 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 OR2AE1Q8NHA4 323 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 YIPF3Q9GZM5 350 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 YAE1D1Q9NRH1 226 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 TREM2Q9NZC2 230 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 DNAJC27Q9NZQ0 273 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 LAMP5Q9UJQ1 280 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 ORC6Q9Y5N6 252 aa11.75□□□□□ -0.53
UPF1-205ENST00000598209 INAFM1C9JVW0 142 aa11.74□□□□□ -0.53
UPF1-205ENST00000598209 APOC1P02654 83 aa11.74□□□□□ -0.53
UPF1-205ENST00000598209 ZNF16P17020 682 aaPredicted RBP11.74□□□□□ -0.53
UPF1-205ENST00000598209 ALOX5APP20292 161 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms